Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00046 ATGATAAAAGAACAAGCTGGTGGTGGTGGTGGCGGTGGGAGCAAGAAAAGCACTACATCGGCTTCCAGCGCAACCACGTCATCACAGCAACAAGAACAACAAGCATCAGTAGCTGCTCTAAAGTGTCCAAGATGCGATTCACCAAACACAAAATTCTGTTACTACAACAACTACAGCCTCACGCAGCCACGTCACTTCTGCAAAACTTGCCGAAGGTACTGGACCAAAGGCGGTGCCTTGAGGAACGTTCCCATTGGCGGAGGCTGCCGTAAGAACAAGAAGCTCAATAAGTCTTCAAGATTACTCTCTTCTCCCTCATCTGACTCCCCTGGAGTAGGATCTTCTTCAGACCTTGCTGTTCTTGGTGGTGGCCTTAAGTTCCTCCATGGTCTCGCTTCTTCAGTTCCCGTACCTCCTTCTCTTGATTTTCNACCACCCTTCTTCTACCATCTTCAACAACAACAACCACTTCGCTTCGTTGCTATCAACAACTTCTTCTAA 501 0.479 MIKEQAGGGGGGGSKKSTTSASSATTSSQQQEQQASVAALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLNKSSRLLSSPSSDSPGVGSSSDLAVLGGGLKFLHGLASSVPVPPSLDFXPPFFYHLQQQQPLRFVAINNFF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00046 166 MobiDBLite consensus disorder prediction 12 33 - -
Aip05g00046 166 PANTHER DOF ZINC FINGER PROTEIN DOF5.7 22 107 - -
Aip05g00046 166 Pfam Dof domain, zinc finger 39 94 IPR003851 GO:0003677|GO:0006355
Aip05g00046 166 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Aip05g00046 166 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Aip05g00046 166 MobiDBLite consensus disorder prediction 1 33 - -
Aip05g00046 166 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 107 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00046 Aip-Chr5 555998 556498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00046 25 108 C2C2-Dof Transcription Factor Family AT1G51700 67.857 9.59e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip05g00046 zf-Dof 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00046 - - aip:107641604 258.84