Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00045 ATGAACGCTCATCATCATGGTAGTAGTAACATTGCTTCTTCTATTGAGTCGTTGAGTTCTATGAACCAGGACTTGCACTGGAAGCTACAACAGCAAAGGTTGGCCATGCTTTTTGGCGGTGGTGGCAGCGGAGATGATGTCAACAATAATCAACAAAAAGACGTTGCTGGTGGCGGCGGCGGCGGCGAACTCGAGAAGCCGCAACCGATTTTGTTTCAGAATCTTGACAGTTCTTCAATCAACAGAAAAGAAGAAAATTCCGTAACTGCCCCAACTGAGTGGTTCTTTGGAAACTCTTATCCCTCGGTGAATCCTACACCAACCACAAGTACCGGCGGTGGCAGCGGCGGCGGCGGTGCCGCCGGCAATGATAACGGAATGAATTGGGTTGGTGTTGGTTGGGGTGACGTGCAGCATCAATACAGTGCTTTGCCCTAG 438 0.5 MNAHHHGSSNIASSIESLSSMNQDLHWKLQQQRLAMLFGGGGSGDDVNNNQQKDVAGGGGGGELEKPQPILFQNLDSSSINRKEENSVTAPTEWFFGNSYPSVNPTPTTSTGGGSGGGGAAGNDNGMNWVGVGWGDVQHQYSALP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00045 145 MobiDBLite consensus disorder prediction 71 116 - -
Aip05g00045 145 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 145 IPR045174 GO:0003700|GO:0006355
Aip05g00045 145 MobiDBLite consensus disorder prediction 40 124 - -
Aip05g00045 145 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 4 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00045 Aip-Chr5 555448 555885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00045 10 145 C2C2-Dof Transcription Factor Family AT5G65590 41.429 8.43e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00045 - - ahf:112747350 229.565