Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04854 ATGTGGCCTACATTAGTGGTTAATAAGATTCTCAAGAAGAGGCTAGGAAGCACCAACTTTGTCGCTGATTATCATCATACTTATGAGCAACCCTTGTTGTCCATTGATGAACAATCCATTCATCATCATCCAAATTACAACAAGTACAACTACAAGGTTTTTGTTAGCACATGGAACGTAGGTGGGGTTGCACCACACCAAGATTTGAACTTGGAGGATTTGTTGGACACATGCAACAACTCCTGTGACATCTATGTACTAGGGTTTCAAGAAATAGTGCCTCTGAAGGCATCAAACGTTCTGGGATCAGAGAACAGCGAGGTTTCTAGCAAATGGAATTCCTTAATCAGGGAAGCTCTGAACAAGAAGACAGAAAATGATGATGAGTGGAAAGGAGACCCACAAGAATTCCAGTGTATCATAAGCAAGCAAATGGTTGGTGTGTTCATATCTGTGTGGACAAGGAAAGATCTTCGCCCTTTCATTCACCATCCAAGTGTCTCTTGTATTGGATGTGGCATCATGGGCTGCTTAGGAAACAAGGGATCGGTGTCAGTGAGATTTCGGTTACATGAAACAAGCTTCTGCTTTGTGTGCAGCCATCTTGCATCAGGGGGCAGAGAAGGAGATGAGAAGCACAGAAACTCTAACGTTGCAGAAATATTTTCCCGGACAACTTTTCCCAAAGGCCCTTTGTTTGATTTGCCAAGAAAGATTCTTGATCATGACCATGTAGTATTGCTAGGAGATCTAAATTATAGAATTTCTCTACCAGAAGAATCAACACGGTTACTTGTTGAAAAAGGAGACTGGGATTCCTTATTACAAAATGATCAGCTAATGATGGAGCTAGAGAACGGAAACATGTTAAGAGGGTGGCATGAAGGGCCAATCAAATTTGCTCCAACATACAAGTATTTTCCAAATTCAGATATGTATTATGGATGTTGTTATCATGGGAAAAAAGCAGAAAAGAAGCGAGCACCAGCATGGTGTGACCGAATAGTGTGGTATGGAAATGGTTTAAAGCAACTTGTGTACAATAGAAGTGAGTCAAAACTATCAGACCACAGGCCTGTGAAGGCAATATTCATAGCTCAAGTGAGGGTTTCAACAGAGCTAGGAAATTTGCAAACCTTGTTTCTATCAGAAAGATTTGAACACATTAAAACTCCTTTTGGAGTTTCTACAACCAATGATGATTTTCTATGTAAAAAACAACTGAGTTTCCGGTTGTGA 1239 0.4044 MWPTLVVNKILKKRLGSTNFVADYHHTYEQPLLSIDEQSIHHHPNYNKYNYKVFVSTWNVGGVAPHQDLNLEDLLDTCNNSCDIYVLGFQEIVPLKASNVLGSENSEVSSKWNSLIREALNKKTENDDEWKGDPQEFQCIISKQMVGVFISVWTRKDLRPFIHHPSVSCIGCGIMGCLGNKGSVSVRFRLHETSFCFVCSHLASGGREGDEKHRNSNVAEIFSRTTFPKGPLFDLPRKILDHDHVVLLGDLNYRISLPEESTRLLVEKGDWDSLLQNDQLMMELENGNMLRGWHEGPIKFAPTYKYFPNSDMYYGCCYHGKKAEKKRAPAWCDRIVWYGNGLKQLVYNRSESKLSDHRPVKAIFIAQVRVSTELGNLQTLFLSERFEHIKTPFGVSTTNDDFLCKKQLSFRL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04854 412 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 387 IPR045849 GO:0004445|GO:0046855
Aip03g04854 412 Pfam Endonuclease/Exonuclease/phosphatase family 57 357 IPR005135 GO:0003824
Aip03g04854 412 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 387 - -
Aip03g04854 412 Gene3D Endonuclease/exonuclease/phosphatase 34 387 IPR036691 -
Aip03g04854 412 SUPERFAMILY DNase I-like 42 369 IPR036691 -
Aip03g04854 412 SMART i5p_5 49 372 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04854 Aip-Chr3 132786151 132789008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04854 50 377 Acyl Lipid Metabolism Gene Families AT1G65580 29.843 6.49e-38 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04854 03 132786151 132789008 Aip03g04854 03 132786151 132789008 ECH