Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04838 ATGCTACCGTCTTCCTCTCCTGCTCTAGTCACATTGTCGCGTCGCCCTATAATTGTTGTTGATCATTCGCTCACTGCAACAATAACCCCAGTCTTCTCACGCCGACGACAATGGCCACAACCCGACGAAGGGAACCAATCAATCCTCCTTCACACTGTTGCGTCGCCTAACTTCGCTGTTGAACCAGCGCTGCAACTCATCTGCCTCAGCAAGGAGCCACCAAAGACGACATCCACTTCGTCACGAAGGAATCTTCGGATGGCACCCACTGTGCCGCGCCCAATCATGTCGTCGACCAGCCCTTACCCAATCTCCTCCCACGCAATTCGTTCGCGTAAAAGGTGGACAAAGAACCCCTCGCCGCTTATTACAACGAATACCCTAAAAAGCAAGGGCCAAACCCTAAAGAGCCGTTTGCACCCACCAATTGTCATGGATGATGATATGTTGAACATGACCAATTGGGGATACTATGAACCCTTCAAAGGAGGGCATCTTGGCCTGCAGCTCATGCCTGGTATGACAGATCGTGACACAAAACCATTTATGCCTGGTCGGGATCCAACTATGTTAGTTAATACAAATGGAGCATTTCACCCTCGAGACTGTGTAGTTTCCGAAGCACAAATGCCAATCAACTATGTGAGGGATAGTTGGATAAGCCAGCGAGATAGGTTTTTCAATATGCAGCCTACCAATCCCAATTATCCTGTTCTTCCGGAAACTTCAGCCGCTCCAACACAAATTACACAGCCACCTGATACATCAAGAGATGAGAAGGCTGATATAGTTGAAGAAACAGTGCAAAAGGAAGGAGTCCAACCAAGGAAACGGCAGGGTAGGGTTGCCTCAACAACTCCAAAAGCGAAGAAACCAAGGAAGCCGAAGGATAAAAGCAATGCTCCTGTCCAAAGATCAAAGCCCATGAAGACAATTGAGTTTGTAATAAATGGAATTGATATGGATATTTCCAGTTTACCCATTCCAGTTTGTTCATGTACTGGGACTCCGCAGCAGTGTTATCGCTGGGGATGTGGAGGATGGCAGTCTGCTTGTTGTACTACAAATGTGTCGACATATCCATTGCCAATGAGCATGAAACGACGTGGGGCAAGGATAGCTGGACGGAAAATGAGCCAGGGTGCTTTTAAGAAGGTATTAGAGAAACTAGCAGCCGAAGGCTATAATTTTGGTAACCCAATTGACCTGAGGAATCACTGGGCTAGACATGGCACCAACAAATTTGTCACTATCAGGTAG 1260 0.4738 MLPSSSPALVTLSRRPIIVVDHSLTATITPVFSRRRQWPQPDEGNQSILLHTVASPNFAVEPALQLICLSKEPPKTTSTSSRRNLRMAPTVPRPIMSSTSPYPISSHAIRSRKRWTKNPSPLITTNTLKSKGQTLKSRLHPPIVMDDDMLNMTNWGYYEPFKGGHLGLQLMPGMTDRDTKPFMPGRDPTMLVNTNGAFHPRDCVVSEAQMPINYVRDSWISQRDRFFNMQPTNPNYPVLPETSAAPTQITQPPDTSRDEKADIVEETVQKEGVQPRKRQGRVASTTPKAKKPRKPKDKSNAPVQRSKPMKTIEFVINGIDMDISSLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSTYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRNHWARHGTNKFVTIR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04838 419 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 145 419 - -
Aip03g04838 419 PANTHER - 145 419 IPR010409 -
Aip03g04838 419 MobiDBLite consensus disorder prediction 255 277 - -
Aip03g04838 419 MobiDBLite consensus disorder prediction 231 308 - -
Aip03g04838 419 MobiDBLite consensus disorder prediction 231 254 - -
Aip03g04838 419 Pfam GAGA binding protein-like family 145 419 IPR010409 -
Aip03g04838 419 SMART GAGA_bind_2 145 419 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04838 Aip-Chr3 132663238 132672707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04838 145 419 BBR or BPC Transcription factor family AT2G01930 57.475 2.48e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aip03g04838 GAGA_bind 3.4e-101 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04838 03 132663238 132672707 Aip03g04838 03 132663238 132672707 ECH