Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04439 ATGATGAATGACCTGATGGGGCTTCTTAGGATTCACATCAAGCGTGGTGTGAATCTGGCGGTTCGTGATGTGAATACCAGTGACCCATACTGCGTGGTTAGGATGGGGAAGCAGAAACTCAAGACACGTATCATAAAAAAGGATGTTAACCCGGAGTGGGATGAAGAGCTTACCCTTTCCGTACAAGATCCCAGCGTTCCGTTCACGCTGACTGTGTATGACCATGACACGTTCACGAAAGACGACCCCATGGGGGATGCAGAGTGTGACATACACCCCTTCATAGAAGCATTGAAGATGAACACTGAAGGCCTCCCAACGGGCACCATAATCACCCGAATACAGCCTAGCAGGCAAAACTGCCTTGCTGAGGAGAGCCGTATTACTCTCGTCGACGGCAAAATTGTCCAAGACATGGTCCTTAGATTGCGACACGTCGAATGTGGTGAGGTTGAAATCCAGTTGCAATGGATAAATATTCCTGGATCTGTCATGTGA 498 0.4859 MMNDLMGLLRIHIKRGVNLAVRDVNTSDPYCVVRMGKQKLKTRIIKKDVNPEWDEELTLSVQDPSVPFTLTVYDHDTFTKDDPMGDAECDIHPFIEALKMNTEGLPTGTIITRIQPSRQNCLAEESRITLVDGKIVQDMVLRLRHVECGEVEIQLQWINIPGSVM 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04439 165 CDD C2_ArfGAP 7 149 - -
Aip03g04439 165 Pfam C2 domain 7 93 IPR000008 -
Aip03g04439 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 2 163 - -
Aip03g04439 165 SMART C2_3c 8 103 IPR000008 -
Aip03g04439 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 92 IPR035892 -
Aip03g04439 165 Gene3D C2 domain 3 163 IPR035892 -
Aip03g04439 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 163 IPR044562 -
Aip03g04439 165 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04439 Aip-Chr3 128721376 128722346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04439 39 162 C2H2 Transcription Factor Family AT1G70790 55.556 1.39e-47 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04439 03 128721376 128722346 Aip03g04439 03 128721376 128722346 ECH
Aip03g04439 03 128721376 128722346 Aip05g02945 05 131288965 131291483 PCT