Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04317 ATGTATAGGCCTGTGCCGGTGGCTGCTTCAGCCACGCCCCGAGGTGGATTGCCTACTGACAGTGGTGACTCTGTGGTGACCTTGGATCAAGTTCCGCGATGGAATGATGCTGATCAGTCCTTGGGGTATGAAAATGGAGAATATTCTGCTACATACTTTCCTGATCCTCTGGCATCGCCTTCTGGTGTAGATGGTAGTAGCATCGGTTCTGTTTCAAGATTTCCTGTTGATCATGAAATTAACTCAAAGATATATTTGTGGAGGGGAAATCCATGGAATCTTGAGGTGGATGCTGTTGTTAATTCAACAAATGAGAATATGGATGAAACACACAGCAGCCCTGGATTGCATGCTGCAGCTGGACCTGGCCTTGCAGAAGAATGTGCGACTCTGGGTGGATGCCGAACGGGGATGGCTAAAGTTACCAATGCATATGACCTTCCCGCCAGGAGAATTATCCACACTGTTGGTCCAAAGTATGCTGTGAAGTACCATACTGCTGCTGAGAATGCTTTAAGTCATTGTTATCGTTCTTGCCTGGAGCTTTTAGTTGATAATGGACTCCACAGTATTGCTATGGGTTGTATTTATACAGAGGCAAAAAACTATCCCCGAGAACCAGCTGCGCATAAAGACAACATAAAAGCTGTTGTCTTTTGCACTACCAGCACAACCGATACAGAGATATATAAACGGTTGCTTCCACTTTACTTTCCACGAGATAAAAACGAGGAGCAGTTTGCATTTTCAAAACTTCCTGCAGATGTTGGAGATGAAAATGGTGAAACCATGATAGATGAGCGTAAAATCAGAATTAAACCTTTGCCTAAAAAGAATGTTTCAAAACCAACTGAAGATCCAGTTGATCTTCCTGTCAGTGATGCTGGCTTGGTTCGCAGGAATTCATCATATTTAGATTCATTTCTGGATCCTGCCTTCATGTCTTTGATTAAAGACCCTGACCAAAGGCGTTTGGAGCAGTGGGAGAAAACTGCTGAAGCACAAAGAGGCTGGAATTGTACCAAATTGCTTGGATATGGTGACCTTGGTGGACCTCCGCTGTCTGCTGCTGAAGAATATTCTCTCCACTCTAGATACCTTTCTAAAGCAAATTCTTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTTTATCGTGGAGGGGTAGACAGTGAGGGTCGACCCGTCATGGTGGTTGTGGGAGCTCACTTTTTGCTCAGATGTCTTGATCTTGAACGATTTGTGCTTCATGTGGTGAAGGAGTTTGAGCCCATAATACAGAAACCTTATACTATTGTCTACTTCCACTCTGCTGCTTCTTTGCAGATGCAGCCTGATCTAGGTTGGATGAGAAGATTGCAACAAATACTTGGTAGGAAGCACCAGCGCAACCTGCATGCAATATATGTCCTTCATCCAACTTTTGGGCTTAAGGCGGCAGTATTTGCGCTACAGATGTTTGTGGATAATGTGGTATATTACAGGAACCTCAACCTATATGATGACCTCATATTGTACATGTTATTATCATTAACCATTTATTTTCAGGTTTGGAAGAAAGTAGTATATGTTGATCGACTTCTGCAGCTCTTCAGATATGTACCTCGCGAACAGTTGACCATACCAGATTTTGTGTTCCAGCATGACTTAGAAGTTAATGGAGGGAAAGGTGTTATTGTGGATCCAAGAACAAAATATGTTTACCAAAGACCAACATGA 1719 0.4282 MYRPVPVAASATPRGGLPTDSGDSVVTLDQVPRWNDADQSLGYENGEYSATYFPDPLASPSGVDGSSIGSVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENMDETHSSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRIIHTVGPKYAVKYHTAAENALSHCYRSCLELLVDNGLHSIAMGCIYTEAKNYPREPAAHKDNIKAVVFCTTSTTDTEIYKRLLPLYFPRDKNEEQFAFSKLPADVGDENGETMIDERKIRIKPLPKKNVSKPTEDPVDLPVSDAGLVRRNSSYLDSFLDPAFMSLIKDPDQRRLEQWEKTAEAQRGWNCTKLLGYGDLGGPPLSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPIIQKPYTIVYFHSAASLQMQPDLGWMRRLQQILGRKHQRNLHAIYVLHPTFGLKAAVFALQMFVDNVVYYRNLNLYDDLILYMLLSLTIYFQVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGVIVDPRTKYVYQRPT 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04317 572 CDD Macro_GDAP2-like 82 237 IPR035793 -
Aip03g04317 572 Gene3D - 376 552 IPR036865 -
Aip03g04317 572 SUPERFAMILY Macro domain-like 70 267 IPR043472 -
Aip03g04317 572 CDD SEC14 381 542 IPR001251 -
Aip03g04317 572 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g04317 572 Gene3D Leucine Aminopeptidase, subunit E, domain 1 18 243 IPR043472 -
Aip03g04317 572 ProSiteProfiles Macro domain profile. 71 238 IPR002589 -
Aip03g04317 572 Pfam Divergent CRAL/TRIO domain 393 549 IPR001251 -
Aip03g04317 572 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 497 - -
Aip03g04317 572 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 509 551 - -
Aip03g04317 572 SMART YBR022w_8 83 212 IPR002589 -
Aip03g04317 572 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 497 - -
Aip03g04317 572 Pfam Macro domain 100 210 IPR002589 -
Aip03g04317 572 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 509 551 - -
Aip03g04317 572 SUPERFAMILY CRAL/TRIO domain 375 495 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04317 Aip-Chr3 127639571 127644719 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04317 03 127639571 127644719 Aip03g04317 03 127639571 127644719 ECH