Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04316 ATGGTCGTCGTTTCAGGATTCCTTCGTCGTACACCGAAACCACGCCTTTGGTGGAGGCCCATTCACCACCACGCATCATTCCACCAACCGCCGCTGCATAAACTGCCGCCAACCTTCTACCTCGCTCGGATGTGCCAAAACGCAGATACTCTCAAGAAGCTCCACGCGACCCTCATAGTCCACGGCCTGTGCGGCGGCGCTGACCAACTCCTCTCCGCCACAAAGCTTCTCAGCCTGTACGGCTCTTTCGGCTTGGTTGGCTCCGCCCGCCGCCTCTTCGACCAGCTCCCTTCACCTGACTTGTACTCCTTCAAGGTCATGATCCGTTGGTACTTCCTAAACGACATGCATTCCGACGTCGTTTCAATCTACGACCTTGCCAGAGTAACACTCGGTGCCTTAAACGAAGACGTCGTCTTCTCCGTCGTACTCAAAGCCTGCCGCGAGCTCCGCGACGCCGTTTCGGGGAAGCGGCTCCACTGCCACGTCATCAAGGCCAGCTATCCCGACAGCTTCGTCCTCACGTGCCTCGTCGACGTGTACTCCAAGTGCGGCCTTGTCGATAGTGCACGCCACGTGTTCGACGAAATATCCGAACGAAATGTGGTGTCATGGACCGCGATGATCGTTGCTTACGTGCAAAACGAGTGTGCCGGAGAAGGGTTGACGCTTTTTAACAAGATGAGGGAATGTTTTATGTCTGGGAATGAGTTCACTGTTGTGAGTTTGGTGAATGCGTGCACAAAGTTGGGATCTTTGCATCAAGGGAAGTGGGTTCATGGGTATGTGATTAAGAGTGGGATTGAGGTTAATTCGTTCTTGGCAAGTTCTCTTTTGGATATGTATGTCAAATGTGGTGACTTGAGGGATGCACAGAAGGTGTTTGATGATGTTTTAGCCGTTGATGTTGTTTCATGGACTGCTATGATTGTGGGGTATGCCCAAAGGGATCACCCTAACATGGCATTGGAGTTGTTCAGTAGTAAGAGATGGGAAGGACTCTTGCCGAATTCCGTTACCCTTTCGAGTGTGCTCTCTGCTTGTGCTCAGATTGGGGATTCCCTTTTGGGAAGGTCACTTCATGTTCTTGCGGTTAAGCTTGGGTGTGATGATGATCATGCTGCGAGGAATGCTCTTATTGATGTATATGCCAAGTGTGGTGCCATGTCGGATGCTCGATGTGTGTTTGAAACCATCCTTGATAAGGATGTTGTCTCTTGGAATTCGATTGTTTCCGGTAGTGCTCAGTGTGGTTGTGCTTATGAAGCTCTTGAGCTGTTTCAAAGGATGAGGTTGGAGTCATTTTCCCCTGATGCGGTTACAATTGTTGGTGTTTTTTCGGCTTGTTCTTCCCTTGGTGCCCTCCAATTTGGTTCCTCTGTTCATGCTTTTTCCTTCAAGTGTGGTCTCATGTCGTCCAGCGTCTATGTTGGCACTGCACTCCTCAATTTCTATTCAAAATGCGGCGATGCAAGATCGGCTCGCATGGTGTTCGATGGCATGGAGGAGAAGAATGCTGTGACATGGGGTGCAATGATTGGTGGATACGGCATGCAAGGCGATGGCAGTGGATCTCTTGCTCTATTTAAGGATATGTTGAGAGAAGAATTTGAGCCTAATGATGTGTTGTTCACAACTATATTAGCAGCTTGTAGCCATTCAGGGATGGTTGGAGAAGGCTCAAGGCTGTTTGATATGATGTGTGGTGAATTGAACTTTGTTCCTTCCATGAAGCATTACGCGTGCATGGTTGATCTTTTGGCGCGTTCCGGCAACCTTGATGAAGCATTAGACTTCATGGACAAGATGCCAGTTCAGCCTAGCGTTGGTGTGTTTGGAGCTTTTCTCCATGGTTGTGGACTCCATTCGAGGTTTGACTTAGGAGAGGTTGCAATCAGGAGAATGCTGGAATTGCACCCTGATGAAGCTTGTTACTATGTCCTTGTGTCAAACCTGTATGCTTCAGATGGAAGATGGGGCATGGTTAAGGAGGTAAGAGAGATGATAAAGCAAAGTGGATTGAGCAAGGTCCCGGGTTGTAGTTCAGTGAAAATTGGTATTAACAATCATCAATATGCTAAAGTAGCAGCTATTGCTTAG 2100 0.4881 MVVVSGFLRRTPKPRLWWRPIHHHASFHQPPLHKLPPTFYLARMCQNADTLKKLHATLIVHGLCGGADQLLSATKLLSLYGSFGLVGSARRLFDQLPSPDLYSFKVMIRWYFLNDMHSDVVSIYDLARVTLGALNEDVVFSVVLKACRELRDAVSGKRLHCHVIKASYPDSFVLTCLVDVYSKCGLVDSARHVFDEISERNVVSWTAMIVAYVQNECAGEGLTLFNKMRECFMSGNEFTVVSLVNACTKLGSLHQGKWVHGYVIKSGIEVNSFLASSLLDMYVKCGDLRDAQKVFDDVLAVDVVSWTAMIVGYAQRDHPNMALELFSSKRWEGLLPNSVTLSSVLSACAQIGDSLLGRSLHVLAVKLGCDDDHAARNALIDVYAKCGAMSDARCVFETILDKDVVSWNSIVSGSAQCGCAYEALELFQRMRLESFSPDAVTIVGVFSACSSLGALQFGSSVHAFSFKCGLMSSSVYVGTALLNFYSKCGDARSARMVFDGMEEKNAVTWGAMIGGYGMQGDGSGSLALFKDMLREEFEPNDVLFTTILAACSHSGMVGEGSRLFDMMCGELNFVPSMKHYACMVDLLARSGNLDEALDFMDKMPVQPSVGVFGAFLHGCGLHSRFDLGEVAIRRMLELHPDEACYYVLVSNLYASDGRWGMVKEVREMIKQSGLSKVPGCSSVKIGINNHQYAKVAAIA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04316 699 Pfam PPR repeat 542 568 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 377 402 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 507 535 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 203 230 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 405 432 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 580 603 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 479 505 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 174 202 IPR002885 -
Aip03g04316 699 Pfam PPR repeat 276 297 IPR002885 -
Aip03g04316 699 Pfam PPR repeat family 302 349 IPR002885 -
Aip03g04316 699 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 56 695 - -
Aip03g04316 699 Gene3D Tetratricopeptide repeat domain 464 559 IPR011990 GO:0005515
Aip03g04316 699 Gene3D Tetratricopeptide repeat domain 68 159 IPR011990 GO:0005515
Aip03g04316 699 Gene3D Tetratricopeptide repeat domain 160 257 IPR011990 GO:0005515
Aip03g04316 699 Gene3D Tetratricopeptide repeat domain 358 463 IPR011990 GO:0005515
Aip03g04316 699 Gene3D Tetratricopeptide repeat domain 258 357 IPR011990 GO:0005515
Aip03g04316 699 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Aip03g04316 699 Gene3D Tetratricopeptide repeat domain 560 694 IPR011990 GO:0005515
Aip03g04316 699 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 403 437 IPR002885 -
Aip03g04316 699 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 302 336 IPR002885 -
Aip03g04316 699 TIGRFAM PPR: pentatricopeptide repeat domain 580 603 IPR002885 -
Aip03g04316 699 TIGRFAM PPR: pentatricopeptide repeat domain 542 576 IPR002885 -
Aip03g04316 699 TIGRFAM PPR: pentatricopeptide repeat domain 507 540 IPR002885 -
Aip03g04316 699 TIGRFAM PPR: pentatricopeptide repeat domain 174 203 IPR002885 -
Aip03g04316 699 TIGRFAM PPR: pentatricopeptide repeat domain 405 439 IPR002885 -
Aip03g04316 699 TIGRFAM PPR: pentatricopeptide repeat domain 203 233 IPR002885 -
Aip03g04316 699 Pfam E motif 622 683 IPR046848 -
Aip03g04316 699 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 505 539 IPR002885 -
Aip03g04316 699 PANTHER OS07G0578800 PROTEIN-RELATED 56 695 IPR045215 GO:0003723|GO:0009451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04316 Aip-Chr3 127635949 127638361 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04316 03 127635949 127638361 Aip03g04316 03 127635949 127638361 ECH