LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g04314	ATGGGAACCAAAGTTCAGAATCTCCCAGGATACTACTCAATGAGAGATCTTAATGAGGAATCCAGCAGTTGTGGCTGGCCGCTATTTTATGAGGATAATAAAGCACTGGTAAATGGGCAGTACTATCATGATTATATGCGAAGTGCTACTACAGATGCATGTTCAGCTTATGAAAAGGATGCTGTGAAGCAGACAATGCTTGAGCATGAGGCCGTATTTAAGAATCAGGTCTTTGAACTTCACCGTTTATACAGAATACAAAAGGATTTGATGGATGAAGTTAAAATGAAAGCATTACACAGGAACCAGATACCTGTTGAGACATCATTTTCCGCAGGTCCATTGGCATCTAGAATAACATCTGAAGATGGTAAAAGATGGAATATTCCTGGATTTCCCACAGGAAGTTCTAATTGTGCCAAAACATCTGTTTCAGGCATTGAGGGTACTTGTTCCCCTTCAAGTTCTAATAAAGGAGCAAATAAGCAAGCTAGTCTATTTCCGTCCCCAAATGGGAGTAGTTCAAAAGATGTTGAGGTGCTGGAGTCCAGACCCTCAAAGGCGAGGAGAAAAATGTTTGACCTTCATCTCCCTGCTGATGAGTATATTGATACTGAGGAAAATGATAAGCTGAATGATGAGAAGATAAGTGGTACGACAATATTTCTTCCTGAAAGAGATTCCAAACATGGAAAGGGAGCCGATGTAAAACCTTTTTTTGGCAATGGTGGAAACACTGGTAGCCAAGAAGACACTTCAAGATCTGAGCAGTTTTTAAGGAGCAGAAGTGGTTTGGCTGACTTAAATGAGCCTGTTCAAGTGGAAGAAACAAATGAGACTTCATGTGTTCCATTTTCAAACCATAATCAATATCAAGAGGCACCTGAGTGTTCTGATCTATCTGCCAAACAGAAGTCAAGGTTTTTTGGTTTGTCCAGGGAAGAATTGCTAAACTCACATCATGGAACTGACAGCTGGGCTCGAAATAATGGATATTCAGAGAACAATGGGAATGGAAAAGGATGGATTTCTTCAGTACTGGAGGCAGGGCATGCTAAAGGAGATTCAAAATACATCCCCCAAGTCCACAAACAAGAGCATTCCCCTTTATCTTCCCAAACAATGAAAGATGCACTCAGAAAAACTCATGAGCCTACATATGGCTTTCAAATTAATCAAAGCAAGGCTGAGTTTTGGAGGGTAAAAAGTGATTTAGATACCAGTGAGAGACGTTTTGCATACTCCACTAATAAACATCCAGAGCCTGTTGGATCATCGCATAGACCTGGTTTCTTTGCAATCACCCCTTCCTCTGATTTATCCAGGTCTTGGTCTCATTCACCTTCTTTGGAAATGGCAAGTGGTAACCTAGGCCAGAAGTTGGTGTCTATTCAGACTGCGCCATCTCAATCCGGTGCCTTGAATAGGAGTTCCCAGCCACAACAAAGCAATGGGATTCTGGGAGATAGGTGGCATACAAATATTAATTCAAAGCTTAATCCAGGTTTTCAATATGATGTACCTGTTCAGAATGGGTTTTACCCTGGGTCTGCATCTGGGTCCAAGGAACTTTCAGTGAACATCTCTTCAATCAGCTATGACTATCTCAACCATAGTAATGACTGCAAGAGAATTCCTGAACACTTCAACAATGGTTCAGCAAAATACTTTAAGAGTTCAAATTCAAAGTGCAATGACATGACATCTGGAAAAGATATTAACTTGAATGTAATGCTTTCAAACAGCTCATCCAACAGCTTGGTTAGCCAGTCAGGTCTTGGAATCAGGAACAGTGAACAGAAACGTGAGGAGCAGCTTGCAGTGTTGCCTTGGCTTAGAGCCATGTCAACATGTAAGAATGAGGTGCAAAATGCTGATAGAAGCTTAACTGCTGGAGAATCAAGTTTTTCCCATGTTGCTTCTTTATCTAACAAAGATGAAATTAGTAAGGGATCTGGTGGAGAATTTTTGCACAATATAGCATCAGGTTTGCGTACTAATGATATTGAGCGAAAGGGGACAGAAATATGTGAGGGCTCTACTGTTAAGAAAATTCTCGGTGTTCCCATATTTGATACGCCTCAAGTTTCTCCTAAGGAACCAACTTCACTGACTTCTCCCTCCTTGTCAGTTCCTAAGCCATCTGGACTGCAATTACTGAAAAATAATGGGAAAAACTGGCTACTTGATATTAACTTGCCTTGCGACGATGATGTTATTGAGTTGGACGATGAAGCTGTCACTGAAACTTTTGTTAGTAAGAAAGGATCTCCTGCAACAGGAGGCAGCTCTAGAAATCAGATTGATCTTAACTTGAGTATGAGTGAGGATGAAGAATTTGTGACACCTCCAACCACCAATGTAAATACAAAGGCAGAAATAGATCTTGAGGTCCCTGCTCTTCCTGAGACAGAGGAGGATGCCACTCCTGAAGAAAGGCAGATTGAAACTCCTGAAGTATTAAGACCAGGCCCACCAAACATGGACGAACAGCAGCAGGATGAAGTTATAAAGTGTGCAGCAGAGGCTATCGTTGTCATGTCAACTCTTTGCTGCAGTCAGGTGGATGATGTGATCAGTATTCCATCAGGAAGTCCAATGGAGGACCCACTAAGTTGGTTTGTGGATTTCGTGTCGTCATGTGTAGATGATCTGGAGAGAAAGCTTGACAATTCAAGGGAACAAGATGGTGAGGATAATGAAGAATCTTCCTCAGGGGAAATCGATTACTTTGAGTCCATGACATTGAAACTGGCAGAGACTAAAGAAGAGGACTACATGCCCACGCCTCTTGTTCCGGAAGACTTCAAAGTGGAAGAATCTGGAACAACATCGTTACCTAGTCGCACGCGAAAGGGGGCGGCAAGGAGAGGAAGGCAGCGGAGGGACTTCCAAAGGGACATCCTTCCAGGCCTCACAACTTTGTCGAGGCATGAAGTAACGGAAGATCTTCAGATATTTGGAGGGCTTATGAGAGCAACGGGTCATTCATGGCAATCAGGGTTAACCAGGAGAAGCTCTTCTAGGAATGGAGGTGGCAGGGGAAGGCGGCGGGTACAGGTCCCCCCATCTNNNNNNNNTGACAATTGA	3090	0.4256	MGTKVQNLPGYYSMRDLNEESSSCGWPLFYEDNKALVNGQYYHDYMRSATTDACSAYEKDAVKQTMLEHEAVFKNQVFELHRLYRIQKDLMDEVKMKALHRNQIPVETSFSAGPLASRITSEDGKRWNIPGFPTGSSNCAKTSVSGIEGTCSPSSSNKGANKQASLFPSPNGSSSKDVEVLESRPSKARRKMFDLHLPADEYIDTEENDKLNDEKISGTTIFLPERDSKHGKGADVKPFFGNGGNTGSQEDTSRSEQFLRSRSGLADLNEPVQVEETNETSCVPFSNHNQYQEAPECSDLSAKQKSRFFGLSREELLNSHHGTDSWARNNGYSENNGNGKGWISSVLEAGHAKGDSKYIPQVHKQEHSPLSSQTMKDALRKTHEPTYGFQINQSKAEFWRVKSDLDTSERRFAYSTNKHPEPVGSSHRPGFFAITPSSDLSRSWSHSPSLEMASGNLGQKLVSIQTAPSQSGALNRSSQPQQSNGILGDRWHTNINSKLNPGFQYDVPVQNGFYPGSASGSKELSVNISSISYDYLNHSNDCKRIPEHFNNGSAKYFKSSNSKCNDMTSGKDINLNVMLSNSSSNSLVSQSGLGIRNSEQKREEQLAVLPWLRAMSTCKNEVQNADRSLTAGESSFSHVASLSNKDEISKGSGGEFLHNIASGLRTNDIERKGTEICEGSTVKKILGVPIFDTPQVSPKEPTSLTSPSLSVPKPSGLQLLKNNGKNWLLDINLPCDDDVIELDDEAVTETFVSKKGSPATGGSSRNQIDLNLSMSEDEEFVTPPTTNVNTKAEIDLEVPALPETEEDATPEERQIETPEVLRPGPPNMDEQQQDEVIKCAAEAIVVMSTLCCSQVDDVISIPSGSPMEDPLSWFVDFVSSCVDDLERKLDNSREQDGEDNEESSSGEIDYFESMTLKLAETKEEDYMPTPLVPEDFKVEESGTTSLPSRTRKGAARRGRQRRDFQRDILPGLTTLSRHEVTEDLQIFGGLMRATGHSWQSGLTRRSSSRNGGGRGRRRVQVPPSXXXDN	1029

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g04314	1029	Coils	Coil	882	902	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	143	183	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	992	1029	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	467	489	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	888	964	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	143	179	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	916	930	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	242	262	-	-
	Aip03g04314	1029	Pfam	Plant protein of unknown function (DUF863)	139	1025	IPR008581	-
	Aip03g04314	1029	PANTHER	-	1	1023	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	273	287	-	-
	Aip03g04314	1029	MobiDBLite	consensus disorder prediction	224	287	-	-
	Aip03g04314	1029	PANTHER	DUF863 FAMILY PROTEIN	1	1023	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g04314	Aip-Chr3	127619454	127625785	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g04314	03	127619454	127625785	Aip03g04314	03	127619454	127625785	ECH