Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03802 ATGGAGAAAGAAGGAGAGGTCAGTAAAGAGCAAGTTGCTGGGCCTCTGCCTCCACCTCCACCTCCGCCTCGACCGCCACCACAGCATAAATGCCCACGGTGTGATTCAGACAACACCAAGTTCTGCTATTACAACAACTACAGCCTGTCACAGCCTCGATACTTGTGCAAAGCATGTAAGAGGTACTGGACACAAGGTGGAACCCTCAGGAATATTCCTCTTGGTGCTTCCAAGAACAAGATCAAGAACAAGCCCAACAAGCGTACCTTCAACACTGCTACTACTACTTCTTCTTCCTCCTCCGGCAAACTCTATTATCAGCATCATGCTGCTGGTTCTACTGCATCATCATTATCATCGTCAGCAGCAGCATCATCAGGGAGCAGCATGGCAGAATATACAACTGCTGCTGCTTCTCACCTTCATCATCAATGGCCCTCTCATGCCAACTACTCTTTCTGGAGTACTACTGTCTGCACCACTTCTTCCATAAGCGCTAATAATAATAATAACAACTCTTCTGAGTCACAGACCAATATCATGCCAAGAACAGCAGCTTCTTCTTCTCCTTCTTTCATCACACCAAATCAATGGCCACATCTCAAATGGAACCACCCTATGCCTCCTCCATGA 633 0.4708 MEKEGEVSKEQVAGPLPPPPPPPRPPPQHKCPRCDSDNTKFCYYNNYSLSQPRYLCKACKRYWTQGGTLRNIPLGASKNKIKNKPNKRTFNTATTTSSSSSGKLYYQHHAAGSTASSLSSSAAASSGSSMAEYTTAAASHLHHQWPSHANYSFWSTTVCTTSSISANNNNNNSSESQTNIMPRTAASSSPSFITPNQWPHLKWNHPMPPP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03802 210 MobiDBLite consensus disorder prediction 86 101 - -
Aip03g03802 210 Pfam Dof domain, zinc finger 28 83 IPR003851 GO:0003677|GO:0006355
Aip03g03802 210 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Aip03g03802 210 MobiDBLite consensus disorder prediction 1 31 - -
Aip03g03802 210 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 177 - -
Aip03g03802 210 SUPERFAMILY Formin homology 2 domain (FH2 domain) 17 154 - -
Aip03g03802 210 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Aip03g03802 210 MobiDBLite consensus disorder prediction 167 210 - -
Aip03g03802 210 MobiDBLite consensus disorder prediction 13 29 - -
Aip03g03802 210 MobiDBLite consensus disorder prediction 73 101 - -
Aip03g03802 210 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 177 IPR045174 GO:0003700|GO:0006355
Aip03g03802 210 MobiDBLite consensus disorder prediction 167 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03802 Aip-Chr3 120351806 120352959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03802 24 80 C2C2-Dof Transcription Factor Family AT4G21050 75.439 2.72e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip03g03802 zf-Dof 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03802 - - aip:107634681 367.081