Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03627 ATGGACGTAGAGGGCGTGGACTACGAAGAGCTGAAGAAGCGCATGTGGAAGGACCGCATGCTGCTCCAGAAGCTGAAGGAAAAGCGTCCTAAGCACGATGACCAAGAAGAAGCCTCGAGGAGGAAGAAGATGGCACGTGCTCAGGACTCCATCCTCAAGTACATGGTCAAGATCATGCAAGTCTGCAACGGTCAGGGCTTCGTCTACGGCATCGTCACTGAGAAGGGAAAGCCCATCACTGGCTCCTCTGAGAGCCTCCGCGAATGGTGGAAGGACCAAGTTAAGTTTGATCAGAGCGCTCCCCTCGCCATCTCCAAGTACCTTCCATCAGGATTACTGGATCACGAAAATGGTGACTTGTATGCAAGTTCCTCCATGCATCTCTTGAATGAACTCCAGGATACTACCCTGGGTTCTCTCCTCTCCGCGTTGATGCAGCACTGTGTGCCACCGCAGAGAAGGTACCCTCTTGACAGAGGGCTGGCTCCTCCGTGGTGGCCCAAAGGCAACGAGCTATGGTGGGGTGAGCAGGGCCTTCTGGCCCAGCAACAAGGCCCGCCCCCTTATAGGAAGCCCCATGACCTCAAGAAGGCATGGAAGGTTTCCGTCTTGGCTGCCGTCATCAAGCACATGTCTCCTGATCTCGATAAGCTTAGAAGCTTGGTGGCTCACTCCAAGACCCTGCAAGCCAAGATGACTGCCAAAGACACTGCCACGTGGTCCAAGGTTGTCAACCACCAACAATCCCTCTCACAAATCACTCCACCATCCCCATCATCCACTGAAACCTCCAAGAGGAAGAGTAGTGTGTTTGATTTCGATGATGGTGGTGCTGATATTGACGATAACAATAGTAAGCAGATGTATGCATGTCAAAACGCTGAGTGTCCGCAGAGTGAGTTGTGCATGGGGTTCCCGGACAAGAACTCAAGGATGAACCATGAGTCCCTATGTGCCTACCGCACGGAACAACCCCATGTTCTTGATGATGACACCAAATTATTGGATGATTTGATGAACATGGACCTAGCATGGTACCATGATGATAATAATCATTTTGGGAACGAAGATCTTGTTGCCTATGAGTTGGCTGAGACTGCAGCGGGTGCCACCATACCACAAGACTATGGACTCTTCAGTTTGAATGCTGGCATTCACGAAGATCTTGGATTGCATGCATCATCAGAACTCCACTTGGAAGCAGGAGGAGATAACAAGAATAACATGCTTGAAGCCTTGAACTTAATCTAA 1251 0.506 MDVEGVDYEELKKRMWKDRMLLQKLKEKRPKHDDQEEASRRKKMARAQDSILKYMVKIMQVCNGQGFVYGIVTEKGKPITGSSESLREWWKDQVKFDQSAPLAISKYLPSGLLDHENGDLYASSSMHLLNELQDTTLGSLLSALMQHCVPPQRRYPLDRGLAPPWWPKGNELWWGEQGLLAQQQGPPPYRKPHDLKKAWKVSVLAAVIKHMSPDLDKLRSLVAHSKTLQAKMTAKDTATWSKVVNHQQSLSQITPPSPSSTETSKRKSSVFDFDDGGADIDDNNSKQMYACQNAECPQSELCMGFPDKNSRMNHESLCAYRTEQPHVLDDDTKLLDDLMNMDLAWYHDDNNHFGNEDLVAYELAETAAGATIPQDYGLFSLNAGIHEDLGLHASSELHLEAGGDNKNNMLEALNLI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03627 416 Gene3D - 119 258 IPR023278 GO:0003700|GO:0005634
Aip03g03627 416 Gene3D - 33 110 IPR023278 GO:0003700|GO:0005634
Aip03g03627 416 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 4 398 IPR006957 GO:0005634
Aip03g03627 416 Pfam Ethylene insensitive 3 9 247 IPR006957 GO:0005634
Aip03g03627 416 MobiDBLite consensus disorder prediction 246 266 - -
Aip03g03627 416 SUPERFAMILY DNA-binding domain of EIN3-like 126 249 IPR023278 GO:0003700|GO:0005634
Aip03g03627 416 Coils Coil 8 28 - -
Aip03g03627 416 MobiDBLite consensus disorder prediction 246 277 - -
Aip03g03627 416 PANTHER ETHYLENE INSENSITIVE PROTEIN 4 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03627 Aip-Chr3 117503113 117504363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03627 4 324 EIL Transcription Factor Family AT5G10120 54.971 5.60e-124 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Aip03g03627 EIN3 2.1e-109 No_clan