Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02087 ATGACCTGTTTACCTTTCATATTTGGTAGGAAGACAACTTCGGCACCAAAACGAGATCCAGATATTGATGAAGAACTTTCAGGCATTCAAAATGTGAGATTATATTCCTACAAGGAACTAAAACTTGCCTCTGACAATTTCAGTCCAAGCAATAAAATTGGGGAGGGTGGTTTTGGTTCTGTCTACAAGGGATTGTTAAAAGATGGAAAAGTTGCAGCTATAAAAGTTCTGTCAGATGAATCAAGACAAGGGGTGAAGGAATTCTTGACAGAGATTAACGTGTTCTCGGAAATACAGCATGAAAATTTGGTTGAGTTATATGGTTGTTGTGTGGAAGGAAATCAGAGAATATTAGTCTACAATTACCTTGAGAACAACAGTCTTGCACAAACCCTTCTAGGTGGAGGTCACAGTAATACCTATTTTAATTGGCGAACTCGAACTCGGATATGCGTTGGGGTGGCTCGAGGTCTTGCCTTTCTTCATGAGGAAGTAACACCACATATTGTTCATAGGGATATAAAAGCAAGTAATATTCTCCTCGACAAGGACCTCTCACCCAAGATTTCAGATTTCGGTCTTGCAAAGCTTATTCCTTCGTACATGACTCATGTCAGCACACGAGTAGCGGGAACAATAGGTTATTTGGCACCGGAGTATGCAATCAGGGGGCAGCTGACACGGAAAGCAGATATTTACAGTTTTGGTGTCCTCATTGTGGAGATAGTCAGTGGGAGAAGTAATACAAACACACTGTTACCGAAAGGGAATCAGTATATTCTTGAAACGACATGGGAACTTTACGAGCGAAGGGAATTGATAGAGCTGGTGGATATATCACTAAACGGGGAATTTGACGCCGAGGAGGCTTGTAAGTTTCTCAAGATTGGCCTTCTTTGCACTCAGAGTAATCCGAAGATTCGACCATCCATGTCCTGTGTTGTCAAGATGCTCACAGGAGAAATGGATGTCGATGAAAGTAACCTAACAAAACCAGGCTTGATTTCAGATTTTATGGACCTTAATATTAGAGAACAAAATAGCAATGATATAAAGACTTCGTCTTCAAGTAAAGATACCACTATATCACTACCTGCTTCAGGTGCGGAAAATACAACGGTCACTGTGAATTATGATCAAAGCTTTTAA 1149 0.4056 MTCLPFIFGRKTTSAPKRDPDIDEELSGIQNVRLYSYKELKLASDNFSPSNKIGEGGFGSVYKGLLKDGKVAAIKVLSDESRQGVKEFLTEINVFSEIQHENLVELYGCCVEGNQRILVYNYLENNSLAQTLLGGGHSNTYFNWRTRTRICVGVARGLAFLHEEVTPHIVHRDIKASNILLDKDLSPKISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLIVEIVSGRSNTNTLLPKGNQYILETTWELYERRELIELVDISLNGEFDAEEACKFLKIGLLCTQSNPKIRPSMSCVVKMLTGEMDVDESNLTKPGLISDFMDLNIREQNSNDIKTSSSSKDTTISLPASGAENTTVTVNYDQSF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02087 382 CDD STKc_IRAK 53 320 - -
Aip03g02087 382 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 362 - -
Aip03g02087 382 PANTHER - 2 362 - -
Aip03g02087 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Aip03g02087 382 ProSiteProfiles Protein kinase domain profile. 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02087 382 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Aip03g02087 382 SMART serkin_6 47 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02087 382 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Aip03g02087 382 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Aip03g02087 382 Pfam Protein kinase domain 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02087 382 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02087 Aip-Chr3 30513304 30518284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02087 17 366 Receptor kinase-like Gene Family AT1G56120 49.716 1.78e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g02087 Pkinase 7.6e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02087 03 30513304 30518284 Aip03g02087 03 30513304 30518284 ECH