Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02075 ATGGATTTGGTGTTCCCCCTGAAACCCCAAACCGCGTTTCTCAAAGTACCCTCCTCTTCAGCCCTCTTCCTCCCCCTTCCTTTCAAGTCCCTTCGTCTTCGTCCAATCTCAGCTACTTCCAAGAACCTCAGGGTTCACTGCGAGCTTGAAAGCAGAGTCAATGGCGCTATTTCTGGTGACTTTGATCCCCGCTTTGTTGACAGGCAAAAAGCACTAGAAGCAGCAATGAATGACATAAACAATTCTTTTGGAAAGGGAAGTGTTACAAGATTGGGCAGTGGCGGTCTTCCGAAAGGTAGAATTGTTGAGATATTTGGACCAGAAAGCAGTGGGAAGACTACCATTGCACTTCATGCTATTGCAGAAGTGCAGAAACTAGGAGGAAATGCAATGCTCGTTGATGCTGAGCACGCCTTTGATCCAGCATACTCTAAATCATTAGGAGTGGATGTAGAAAATTTGATTGTCTGCCAACCTGATCACGGAGAGATGGCTCTTGAGATTGCAGATCGAATGTGTAGATCTGGTGCCGTAGATCTCATTTGTGTGGATTCTGTCTCAGCTCTCACTCCACGAGCAGAAATTGAGGGTGAGATTGGAATGCAGCAAATGGGGTTGCAAGCTCGCCTTATGAGTCAAGCTTTACGCAAGATGTCTGGAAATGCCTCAAAAGCTGGCTGTACACTAATATTTTTGAATCAAATAAGATATAAGATTGGCGTCTATTATGGAAATCCAGAAGTGACAAGTGGTGGAATTGCATTGAAGTTCTTTGCGTCAGTTCGGCTAGAAGTTCGTCCTATAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGGCCTTAAAGTCCGTGCAAGAGTGCAAAAGAGCAAGGTATCAAGGCCTTACAAAATAGCTGAATTCGAGATTATATTCGGTGAAGGAGTCAGTAAGCTGGGTTGCATTTTAGATTGTGCAGAAATACTGGACATTGTCCTAAAGAAAGGTTCTTGGTACAGCTATGGGGACCATCGATTGGGACAGGGAAGGGAGAAAGCAATACAGTACTTGAAGGAGAACACACACATTTTAGAGGAAATCGAAAAGGTAGTTCGGTCTTCATTGGTCGAGGGAACAAACCAAACAAACCTCGCATTCACAAAGAGCGGTCCAGTTCTCCATCAAGATGATGATATCTTTGATGAAGGAGATAATGAGAGCTGA 1206 0.4411 MDLVFPLKPQTAFLKVPSSSALFLPLPFKSLRLRPISATSKNLRVHCELESRVNGAISGDFDPRFVDRQKALEAAMNDINNSFGKGSVTRLGSGGLPKGRIVEIFGPESSGKTTIALHAIAEVQKLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEVRPIGKIKSAKGDEEIGLKVRARVQKSKVSRPYKIAEFEIIFGEGVSKLGCILDCAEILDIVLKKGSWYSYGDHRLGQGREKAIQYLKENTHILEEIEKVVRSSLVEGTNQTNLAFTKSGPVLHQDDDIFDEGDNES 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02075 401 Hamap Protein RecA [recA]. 68 372 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 ProSitePatterns recA signature. 254 262 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Aip03g02075 401 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 91 379 - -
Aip03g02075 401 ProSiteProfiles RecA family profile 1. 61 235 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aip03g02075 401 TIGRFAM tigrfam_recA: protein RecA 91 366 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PRINTS RecA protein signature 168 197 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PRINTS RecA protein signature 251 279 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PRINTS RecA protein signature 206 235 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PRINTS RecA protein signature 286 315 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PRINTS RecA protein signature 134 163 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PRINTS RecA protein signature 340 357 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 SMART AAA_5 98 269 IPR003593 -
Aip03g02075 401 CDD recA 67 369 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PANTHER RECA 64 93 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 64 93 - -
Aip03g02075 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 310 IPR027417 -
Aip03g02075 401 Gene3D - 83 378 IPR027417 -
Aip03g02075 401 ProSiteProfiles RecA family profile 2. 240 315 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Aip03g02075 401 Pfam recA bacterial DNA recombination protein 91 311 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 PANTHER RECA 91 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip03g02075 401 SUPERFAMILY RecA protein, C-terminal domain 311 367 IPR023400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02075 Aip-Chr3 30236437 30249534 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02075 03 30236437 30249534 Aip03g02075 03 30236437 30249534 ECH