Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02030 ATGGTGAAAATGGTGAAAGTTGAAAGGAGCCACAAAGAGGCAATACAAGAACAGCAGCAGAAAGGCGCAATATGGAAATTTTGCTGGAATTTTTCCAAGAGGACACCTCTTCCACTTTGGTGCATCCCTAAAGGGACTTTTGCCAGAAGCAGAAGGAGCAGAACCAGCGGTGGCAGTTGCACAAGCAACAACAACAACAAGAGGAAGAAGAGGCTGGAAGAGGAAAAGCAAAGCAACAACAACAGCAGCAGCAACCACAAGGTTCTGAGTCTGGATCCTTACAGGAACCATCGTCAGCAACAGCATCAGCACCAACATCATCATCATCAACAATATCATCCTCATCATCATCAAAACCCGGGAATAAATCCAAGTCATGTAGAAGAGGACGAAGGAGAAGAAGAAGAAGAAGAAGAGGAGCAAGATTCTCCTTCTCACCACCACCAAGACCCGAATTTTCATCTCCAATTCCAATATCTCCAACCACAACAACCACCACCACCTTCTTACATAAGCATAGACACCGACCTTCTAAACCCACTGCAACCACCAAGAAAACGTTCTTTTCTTCATCCACCTCTTCTTCCTACAGCGTCATCATCATCACCATCACAGACTCCCACTCCTACTCCCACTCCCACTCCCACTCCCATCGAATATGCAAGAAAAATGGGAGAAACACAGCACCACCGTCCAACATCGTCAAGACTTGGGATGAGGGCCGTGGCCGGAGGAGGAGGAGGAGGAGGGGGAGAAATTGTGGAGGTCCAAGGAGGCCACATTGTGCGGTCCACCGGCCGGAAGGACCGACACAGCAAGGTCTGCACAGCCAAGGGCCCGAGGGACCGCCGTGTGCGACTCTCCGCACACACCGCCATCCAGTTCTACGACGTTCAGGACCGACTCGGCTACGACCGCCCAAGCAAGGCCGTCGACTGGCTCATCAAGAAAGCAAAGGCCGCCATCGACGAGCTCGCGGAGCTCCCCGCATGGAAACCAACTGCCACTACCACGACCGTCGCCGCCGCCGCCGCCGCGGCCTCGAACTCAAATGTTGCTGTTCAGCAGCAGAAGCTCCGGGAGGAGGAGGAAAACCAACAGCTGAATCAAATCGTCCACCGCCAATCGACCACGGTGGACGACGCTATGGAAGCTTCTGGTAGCCGAAAGGCTACCGCACTGGTTGGTGGCAGTGGAAGAATCTCGGAATTTCAACCGCAACATTTGAACGACGATAACGGTAGTAGTGGCAAATACAACAGTGGCGGTTCTGGTTTCTTTCCGCCGACTTTGGACACTGATATAGCTGATACCATTAAGTCTTTCTTTCCGATGGTGGGGCCGGGGGAGGTTGCAACAACGACGTCGTCCTTTCATAACTATCCTCCACCGCCGGATTTGCTTTCGCGTACAACTAGCGGCGGAAGCAACCACAACCACCACCATCACCATCACCATCACCAACAGCAAGATCTGCGGCTCTCGCTGCAGTCTTTCCAGGACCCATCGATTCTTCTTCAGCACCACCAACAACAGCAGCAGCAGCCGCCACACCAACAGCATGTTCACGAGCAAGTGCTCTTCGCCGGAACCACCGCACTAGCGTTCGACGGCGGTTCTTCCGGATGGTCTGAACAGCAGCACCACCAAGAGGAACAGGAGCATGGACGATTGCAGAGAATGGTGGCTTGGAATAATGCCGCTGCAGATGCTAGTAGCAGTGGCCATGCCAGTGGATTCATCTTCAACTCGTCGGCGACGGCGGCTGTGCCGTCTCCTGCGATGTTTGGCCATGGCCAGTTTTTTCCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGTTTCGTGCTTGGATAGATCCTTCTTCGATCGCCACGGCTGCCATGACTGTGGATCACCACCACTATCTTTCACCGGCCGCGATCCATCAAGCTTCTATTGGGTTTGCCGGCTCTTCTTCCGGTAGCTTCTCTGGCTTCCGCATACCAGCACGAATTCAGGGTGCGGAGGAGCACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCATTGA 2070 0.5362 MVKMVKVERSHKEAIQEQQQKGAIWKFCWNFSKRTPLPLWCIPKGTFARSRRSRTSGGSCTSNNNNKRKKRLEEEKQSNNNSSSNHKVLSLDPYRNHRQQQHQHQHHHHQQYHPHHHQNPGINPSHVEEDEGEEEEEEEEQDSPSHHHQDPNFHLQFQYLQPQQPPPPSYISIDTDLLNPLQPPRKRSFLHPPLLPTASSSSPSQTPTPTPTPTPTPIEYARKMGETQHHRPTSSRLGMRAVAGGGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWKPTATTTTVAAAAAAASNSNVAVQQQKLREEEENQQLNQIVHRQSTTVDDAMEASGSRKATALVGGSGRISEFQPQHLNDDNGSSGKYNSGGSGFFPPTLDTDIADTIKSFFPMVGPGEVATTTSSFHNYPPPPDLLSRTTSGGSNHNHHHHHHHHQQQDLRLSLQSFQDPSILLQHHQQQQQQPPHQQHVHEQVLFAGTTALAFDGGSSGWSEQQHHQEEQEHGRLQRMVAWNNAAADASSSGHASGFIFNSSATAAVPSPAMFGHGQFFPQRGPLQSSNTPSFRAWIDPSSIATAAMTVDHHHYLSPAAIHQASIGFAGSSSGSFSGFRIPARIQGAEEHDGVSDKPSSASSDSRH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02030 689 MobiDBLite consensus disorder prediction 454 475 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 394 425 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 666 689 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 48 219 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 454 493 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 403 425 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 667 689 - -
Aip03g02030 689 ProSiteProfiles TCP domain profile. 267 325 IPR017887 -
Aip03g02030 689 MobiDBLite consensus disorder prediction 100 115 - -
Aip03g02030 689 PANTHER TRANSCRIPTION FACTOR TCP4 224 689 - -
Aip03g02030 689 MobiDBLite consensus disorder prediction 49 65 - -
Aip03g02030 689 Coils Coil 345 371 - -
Aip03g02030 689 Pfam TCP family transcription factor 266 376 IPR017887 -
Aip03g02030 689 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 224 689 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02030 Aip-Chr3 28992210 28994944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02030 229 689 TCP Transcription Factor Family AT3G15030 46.122 1.00e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip03g02030 TCP 2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00983 08 11513381 11516141 Aip03g02030 03 28992210 28994944 ECH
Aip03g01850 03 23526592 23528491 Aip03g02030 03 28992210 28994944 ECH
Aip03g02030 03 28992210 28994944 Aip03g02030 03 28992210 28994944 ECH
Aip03g02030 03 28992210 28994944 Aip08g00983 08 11513381 11516141 PCT