Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01850 ATGGGGATGAGGAGCAATAGTAATAAAGGAGGAGAAATTATTCAAGTTGAAGGGGGCCACATTGTGAGGTCCACAGGGAGAAAAGACCGCCACAGCAAGGTCTACACCGCCAAAGGACCACGCGATAGAAGGGTCAGGCTATCCGCCCACACCGCCATCGAATTCTACGACGTTCAGGACCGTCTCGGCTACGACCGCCCCAGCAAAGCCGTCGATTGGCTCATCAAGAAAGCTCAGCCCTCCATCGACAAGCTAGCCGAGCTTCCTCCCTGGCACCCACCCCTCTCAGCCGCCCCGCCGCACCAGGATCAAGAAGAAGAAGAGGAGGAGGTGGAGGAGAATCATCAACATAATAATGATATTATTCATCAGCAATTCCTTCAGATTCAGCAACAGCAGCAACAAAACCTTGAAACTGACCCCATAGCTTTCTTCCCTACAAGCTCAGCTACTCCCTCTATGAATTTCCAAAACTACCCTCACCAGATGATTTCAAGAACCGCCAACAACAACGTTAACCCCATTACGGAAGATCTTGGACTTTCACTCCACCCGTTTCAACAAGCACCTTCGAATCAACATCAAGGTACTCTCTTTGGTGCTGGATCCAGTAACAACGTCGGATTTGAGAGCCAGTATCAGAAGATTGTAGCTTGGAACAACGAAGCTGCTACCATGGATATCAACAGGGTAGGGTTCATGGTGAACCCGCAGCAGAATCATCATCATCCATTTCTAGGCCAAAGTGTGAGTGGGTCCCTTCAGTCAAGTTTTCCACCACCATCACTTAGATCTTGGGGTGAAATTCAGATGAACCCAAACTCCTCGGAACAACAACACAGCAGGCCACAACAACTGATTCACCATGCTTCCATATTTGGAAGCAGATTTGTTTCTGATGGATTAGCAGCAGGGTTTTGCATTCCAGCTAGAATTCAAGGCGACCAAGAGAACCATCATGGAGTTGCTTCTAACACCACTCCATCTTCTGCTTCTCCTCATTCTCACCACTGA 1014 0.4872 MGMRSNSNKGGEIIQVEGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAQPSIDKLAELPPWHPPLSAAPPHQDQEEEEEEVEENHQHNNDIIHQQFLQIQQQQQQNLETDPIAFFPTSSATPSMNFQNYPHQMISRTANNNVNPITEDLGLSLHPFQQAPSNQHQGTLFGAGSSNNVGFESQYQKIVAWNNEAATMDINRVGFMVNPQQNHHHPFLGQSVSGSLQSSFPPPSLRSWGEIQMNPNSSEQQHSRPQQLIHHASIFGSRFVSDGLAAGFCIPARIQGDQENHHGVASNTTPSSASPHSHH 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01850 337 MobiDBLite consensus disorder prediction 318 337 - -
Aip03g01850 337 MobiDBLite consensus disorder prediction 244 285 - -
Aip03g01850 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 337 IPR005333 GO:0003700
Aip03g01850 337 ProSiteProfiles TCP domain profile. 27 85 IPR017887 -
Aip03g01850 337 MobiDBLite consensus disorder prediction 1 32 - -
Aip03g01850 337 PANTHER TRANSCRIPTION FACTOR TCP4 8 337 - -
Aip03g01850 337 MobiDBLite consensus disorder prediction 317 337 - -
Aip03g01850 337 MobiDBLite consensus disorder prediction 85 116 - -
Aip03g01850 337 Pfam TCP family transcription factor 26 135 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01850 Aip-Chr3 23526592 23528491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01850 6 337 TCP Transcription Factor Family AT1G53230 39.257 3.97e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip03g01850 TCP 5.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01850 03 23526592 23528491 Aip03g02030 03 28992210 28994944 ECH
Aip03g01850 03 23526592 23528491 Aip03g01850 03 23526592 23528491 ECH