Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01102 ATGCTTCAAAGCTTGGTCCCTCGTTCGCCTATTACTCCAAACCCTAACTCCATGAAGACCAAGCGTGACCGCCACGACGCCACCGCTGATTCCCCCGCTGACGAGGAGCCTTCCTTCAAGCGCGCTAACTTCTCCGGTGAGAAGTCATCGGCGCAGGCCGTGGGAGAAGCTGAGGGACACCACGAAGAACAGCAGCAACAGGTTCTGGAAGTGGCGGAGGCCAGAGGAGGAGAATCAACCGGCCTTAAGCTCCTCGGTTTGCTGCTCCAATGCGCGGAGTGCGTCGCCATGGACAACCTTGACTTCGCGAACGACCTCCTCCCGGAGATCGCGGAGCTCTCGTCGCCGTTCGGAACCTCGCCGGAGCGCGTCGGCGCGTACTTCGCACAGGCTCTGCAGGCTCGCGTGGTGAGCTCATGCCTCGGAGCGTACTCACCTCTCACCGCGAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCGTTCCAGTCCTACAACTCGGTGTCGCCGCTCGTCAAGTTCTCTCACTTCACCGCAAACCAAGCGATCTTCCAAGCTCTCGACGGCGAGGATCGCGTCCACATCATCGACCTCGACATCATGCAAGGTCTTCAATGGCCAGGACTCTTCCACATCCTTGCCTCGCGATCCAGGAAGATCCGCTCCATGCGGATCACCGGATTTGGATCCTCGTCGGAGCTTCTAGAATCCACCGGAAGACGCCTCGCCGATTTCGCTAGCTCGCTCGGTTTACCGTTCGAGTTTCATCCGGTGGAAGGAAAAATCGGAAGCATCACGGACCTGAGTCAACTCGGCGTTCGACCAAATGAAGCGATCGTAGTTCACTGGATGCACCATTGCTTATACGACATAACAGGGAGCGATTTAGGGACGTTGAGATTGCTGAGTCAGCTGAGGCCGAAGCTGATCACGACGGTGGAGCAGGATCTGAGCCACGCCGGGAGCTTCCTCGCGAGGTTCGTGGAGGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTGGGAGACGGTTTGGGTGCGGACAGTTTGGAGAGGCACACGGTAGAGCAGCAGCTTCTAGGGTGCGAGATCAGGAACATCGTGGCCGTTGGAGGTCCCAAGAGGACCGGCGAGGTTAAAGTGGAGCGCTGGGGAGAGGAGTTGAGACGGGTCGGATTTCGACCCGTTTCTCTTCGGGGAAACCCGGCCTCGCAGGCTAGTTTGCTCCTTGGGATGTTCCCTTGGAGAGGGTATACCCTCGTTGAGGAAAACGGTTCTCTCAAGCTTGGTTGGAAGGATCTTTCTTTGTTGACCGCTTCTGCTTGGCAACCGTCCGATTTGATTACTTATCCTGAATGA 1365 0.5722 MLQSLVPRSPITPNPNSMKTKRDRHDATADSPADEEPSFKRANFSGEKSSAQAVGEAEGHHEEQQQQVLEVAEARGGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGAYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSRKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFHPVEGKIGSITDLSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLSQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWGEELRRVGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLTASAWQPSDLITYPE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01102 454 ProSiteProfiles GRAS family profile. 75 445 IPR005202 -
Aip03g01102 454 MobiDBLite consensus disorder prediction 18 42 - -
Aip03g01102 454 MobiDBLite consensus disorder prediction 1 17 - -
Aip03g01102 454 Pfam GRAS domain family 86 445 IPR005202 -
Aip03g01102 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 446 IPR005202 -
Aip03g01102 454 MobiDBLite consensus disorder prediction 1 66 - -
Aip03g01102 454 PANTHER SCARECROW-LIKE PROTEIN 23 58 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01102 Aip-Chr3 10706909 10709407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01102 79 448 GRAS Transcription Factor Family AT5G41920 73.067 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip03g01102 GRAS 3.4e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01102 - - gmx:100816249 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01102 03 10706909 10709407 Aip03g01102 03 10706909 10709407 ECH