Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00129 ATGAAGCACTTCATGCTGCCAAGAAATGCAATCTTGCGGGAGACACACACTCCTACTCCCGCAGAGTTCCCTTCTCCTTCACCTTCACCTTCCTCAACCGCCAAAAAACCCAGGCCATCTCGCAGGAACAGATCCACCAAGGAGAATGATCCTCCTCCCGAACACCACAATGCCCGATTCAAAAGCCTCTTGCCTCCGAGGCCTCCCTCTTCAAACCCTCTCAAGCGCAAGCTCGCCCTTGATGTCCCTCTTACTGACAACTCAGTCCCCGCCAATTTCGATTCTGGGGTCAAGGTGGTTGTGAGGATGAGACCTCTGCGCCACGACAAGGAGGAAGTGGATTCTTCTGCGGTTAAGAAGATTTCCAATGATTCATTGTTCATCAACGGTCAGAATTTCACATTTGATTCTGTTGCTGACACTAACGCTACTCAGCTAGACATTTTTGAGCTTGTCGGGGCGCCTCTTGTGGAGAATTGCTTGGCAGGATTCAATAGTTCTGTATTCGCATATGGGCAGACGGGAAGTGGAAAGACGTATACAATCTGGGGACCTCCCAATTCTTTGTCAGAAGACAATATAACAAATGATCAGAGAGGCCTTACGCCACGTGTATTTGAGAGACTTTTTGCCCGCATAGACAAAGAGCAAACTAAGCATTCTGACCAGCAACTCAAGTATCAGTGCCGCTGTTCTTTTATTGAGATATACAATGAACAAATAACAGATCTATTAGATCCAAATCAAAGAAACCTACAGATCAGAGAAGATGTCAAATCTGGCGTCTATGTTGAAAATCTTACAGAAGAGCCTGCCTGTTCTATGAAGGATGTGACTCAGCTTTTAATTAAGGGACTGTCAAACAGAAGAGTAGGTGCAACTAGTATAAATTCTGAGAGTTCTCGCTCTCACACTGTTTTTACTTGTGTTGTTGAGTCTCGATGTAAGAGCTCTGCAGATGGTATAAGCAGATTTAAAACAAGTAGAATCAACCTTGTTGATTTAGCTGGGTCTGAGCGACAAAAATTAACGGGTGCTGCCGGAGAGCGTTTGAAGGAAGCTGGCAATATTAATAGATCACTTTCACAGCTTGGGAATTTGATAAACATTCTAGCTGAAGTTTCTCAGACAGGAAAGCAGCGACATATACCATATAGAGATTCCAAGTTGACATTTTTATTGCAGGATTCCCTTGGAGGAAATGCAAAATTAACAATGGTTTGTGCTATTTCCCCAGCACAAAGTTGTAGGAATGAAACTTTCAGTACTCTGAGATTTGCACAACGTGCCAAAGCTATCAAGAATAAAGCAGTTGTTAATGAAGTTATGCATGATGATGTGAACCACTTACGGAAAGTGATACGCCAACTCAGGGATGAGCTGCATCAAATTAAAGCAAATGGTTACAGTCCAAGTGATGGAAGTAGAGGCCATTCAACAGCTTGGATCCAAAGAAGTTTGAATTTATTGCAGTCTAGCCTTAGCCGCCCACAATCACTACGTCATGTTGATGATGATGGTGATGAGGTGATGGAGATTGTTGAGCATGGAGTTGATGACCATTTGGTAACTCTCCACAATACTGATGGAGGTTCTGCTGCCCTGTCAGCCCCCAATGCATCTGTTGATTCTCCTAATCCTAGGGCTTCAATGAATTGTGAGTCCCTATCTAACCCTGGTGTAGCCCAATGCAATTCACCCCCTAACCTCAAATCCCCAACTCCCAGTGTTTCACCAACAATTACCAGTAGCAGGAAAAGTCTGAAGACTTCGTTAAGGCTGTCTCCTTCTAATAATATTCTTCAAGGTGAAAGTGAGTTAGACACACAAATTGTTGATCAGAAATTGTGTACGGGCTTTTCTGGCCAGGAAGCTCCAAATTTCCTTACTAAAAATGAAAATTTAGCTGCAAGCATTGGTCTTGATGTTATTGGTAGCCAGCATCATAGTTCAGCTTTGAGGCAGTCATCGTTGCAGCTCTCATTCAAACACAGGGGATCCAAGCTAATATGTCAAGCTAACAAAGTTGACGTGGGAGTGCAGACTTTTCTCGACAATAATGCTAGAGAAGAAGATTCTGTTGTGTTTGACTGCAATAACTGTAAAAGCATAGTGCAGCATGATGTCACTGAGATAGATGAAGGTTCAAACATGCAGCTGGTGCCTGTTGGTTGCCCTGAGTCAGCAGATAAGCCGAAGAAGAAGAAAATTCTAAAAGCAATAGAGAAGGTTTTGGCTGGATCTATAAGGAGAGAAATGGCGCTGGAAGAGTTTTGTGCGAAGCAGACTTCTGAGATAATGCAGCTCAATCATTTATTGCAACAATACAAGCATGAGAGGGAATGCAACGCCATAATTGCACAGACAAAGGAAGAAAAGATTCTTCGCCTTGAGAGTCTTATTGATGGTGTTTTACCCGCTGAGGAGTTTTTGGATGAAGAGCTGATTTCCCTCAGGCATGAACACAAGCTTTTAAAGGAGAATTATGAACATCATCCAGAAGTTTTGGAGATGAAGATAGAATTAAAAAGAGTACAAGATGAGATAGAAGAGTACCAGAATTTCTACAAATTGGGGGAGAAGGAAGTGTTGATGGAGGAGATACAAAGTCTAAGAAACCAGCTTCAATTTTATGTAGACTCCTCAGCCACATCAGCAAGAAAGCAATATCTGCCATTGCAATTGACTCATTCATCTGAACCTAGTTTGGCAGCAAATCTCACTGCCATTCCAGATTCAACAGAGGGTGGTGACTGGGAAAGTGAAAATCCAGTATTTACTAAGGACAGTGCCAAAGAAAAACTTGAACATGAAAGAAGTCAATGGGCCGATGCCGAGAGAAAGTGGATTTCACTTACCAAAGAACTGAGTGCTGAGCTTGAAGCTAACAGGTCACTGGCTGTAAAGAGGAAGCAGGAACTAGATGCTGAGAGGAAGTGTGTTAGGGAACTGAATCAAGCAATGCAAACAGCTATAGAAGGCCATGCACGACTTCTAGAGCAATATGCAGATCTGGAAGAGCAACATGTAGAATTGCTTGAAAGGCATAGAAAGATCCAGGATGGAATAGACGATGTCAAGAAAGCAGCTTCCAGAGCAGGGGTAAGAGGTCCAGAGTCTAAGTTCATAAATGCCCTAGCTGCTGAAATTACAGCATTAAAAGCTGAAAAAGAAAAGGAAATGAAAATCTTAAGGGATGAAAATAGAGGCCTTCGAGCCCAATTGAAGGATACCAGTGAAGCAGTTCAAGCTGCAAGTGAAGTGCTTGTGCAGCTTAAAGAAGCAGAGGAAGGTGTCATTACTGCACAGAAGCGGGCTATGGATGCTGAGCAGGAAGCTGCAAAGGCCTACAAACAAGTTGATAAATTGAAGAATAAACATGAGAAGGAGATAACCGCACTCCAAGAACTGCTTGCCGAAGCACGTTTGCCTAAGAAAGAAAGAGAACCAACTGGTAATCATGGTGTAATTCAACAATTTGAGCCATTCTGTAATGAAGAGGACAGCGACCTTGCAAAACTAGCAGAACAATCTTGGTTCTCTGGTTATGACAGATGTAACATATAG 3567 0.4284 MKHFMLPRNAILRETHTPTPAEFPSPSPSPSSTAKKPRPSRRNRSTKENDPPPEHHNARFKSLLPPRPPSSNPLKRKLALDVPLTDNSVPANFDSGVKVVVRMRPLRHDKEEVDSSAVKKISNDSLFINGQNFTFDSVADTNATQLDIFELVGAPLVENCLAGFNSSVFAYGQTGSGKTYTIWGPPNSLSEDNITNDQRGLTPRVFERLFARIDKEQTKHSDQQLKYQCRCSFIEIYNEQITDLLDPNQRNLQIREDVKSGVYVENLTEEPACSMKDVTQLLIKGLSNRRVGATSINSESSRSHTVFTCVVESRCKSSADGISRFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSKLTFLLQDSLGGNAKLTMVCAISPAQSCRNETFSTLRFAQRAKAIKNKAVVNEVMHDDVNHLRKVIRQLRDELHQIKANGYSPSDGSRGHSTAWIQRSLNLLQSSLSRPQSLRHVDDDGDEVMEIVEHGVDDHLVTLHNTDGGSAALSAPNASVDSPNPRASMNCESLSNPGVAQCNSPPNLKSPTPSVSPTITSSRKSLKTSLRLSPSNNILQGESELDTQIVDQKLCTGFSGQEAPNFLTKNENLAASIGLDVIGSQHHSSALRQSSLQLSFKHRGSKLICQANKVDVGVQTFLDNNAREEDSVVFDCNNCKSIVQHDVTEIDEGSNMQLVPVGCPESADKPKKKKILKAIEKVLAGSIRREMALEEFCAKQTSEIMQLNHLLQQYKHERECNAIIAQTKEEKILRLESLIDGVLPAEEFLDEELISLRHEHKLLKENYEHHPEVLEMKIELKRVQDEIEEYQNFYKLGEKEVLMEEIQSLRNQLQFYVDSSATSARKQYLPLQLTHSSEPSLAANLTAIPDSTEGGDWESENPVFTKDSAKEKLEHERSQWADAERKWISLTKELSAELEANRSLAVKRKQELDAERKCVRELNQAMQTAIEGHARLLEQYADLEEQHVELLERHRKIQDGIDDVKKAASRAGVRGPESKFINALAAEITALKAEKEKEMKILRDENRGLRAQLKDTSEAVQAASEVLVQLKEAEEGVITAQKRAMDAEQEAAKAYKQVDKLKNKHEKEITALQELLAEARLPKKEREPTGNHGVIQQFEPFCNEEDSDLAKLAEQSWFSGYDRCNI 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00129 1188 ProSiteProfiles Kinesin motor domain profile. 96 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 Coils Coil 447 467 - -
Aip03g00129 1188 Pfam Kinesin motor domain 113 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 MobiDBLite consensus disorder prediction 43 61 - -
Aip03g00129 1188 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 PRINTS Kinesin heavy chain signature 294 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 PRINTS Kinesin heavy chain signature 329 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 PRINTS Kinesin heavy chain signature 383 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 ProSitePatterns Kinesin motor domain signature. 328 339 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip03g00129 1188 MobiDBLite consensus disorder prediction 1 75 - -
Aip03g00129 1188 Gene3D Kinesin motor domain 90 467 IPR036961 -
Aip03g00129 1188 Coils Coil 1043 1140 - -
Aip03g00129 1188 PANTHER PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 70 1164 - -
Aip03g00129 1188 Coils Coil 759 779 - -
Aip03g00129 1188 Coils Coil 928 948 - -
Aip03g00129 1188 MobiDBLite consensus disorder prediction 534 588 - -
Aip03g00129 1188 PANTHER KINESIN-RELATED 70 1164 IPR027640 GO:0003777|GO:0007018
Aip03g00129 1188 SMART kinesin_4 94 441 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00129 1188 Coils Coil 957 977 - -
Aip03g00129 1188 Coils Coil 835 881 - -
Aip03g00129 1188 Coils Coil 988 1015 - -
Aip03g00129 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 465 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00129 Aip-Chr3 1163720 1169863 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00129 03 1163720 1169863 Aip03g00129 03 1163720 1169863 ECH
Aip06g00088 06 830961 833087 Aip03g00129 03 1163720 1169863 ECH