Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03154 ATGGAGAGTGTGTGGAAGCCTAATGTTGAGATATCCCCAAATTGCCCTCGGTGTGGTTCCTCCAACACAAAGTTTTGCTACTACAACAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAGGGCTGTAGAAGGTACTGGACAAAAGGTGGGTCCCTCCGGAACGTTCCGGTCGGCGGCGGCTGCCGGAAGAATAGAAGAGGTAATAAAACCCTAAGACAATCCCTTGAAGGCCTTAATTTCAAGAATTCATCATCATCACCATCACATGATCATACCTCAAATAACCCTAACCCTAACCCTATTATTGGCCATCATCATTCTAATAGATCCTCATCACCAGTGATAGCTGATGGACCAAACATTGACCTTGCCCTAGTTTATGCAAATTTCCTCAATCAAAAGCCAAATTCAGGAGATGGGGTGGTTGAGAACAATAACAATAATCAAGATCATCATCATCATCAATTATTGCAACCAGTTTTTGATGATCCTTCTCTAGAAGATGGTCCAAGTAGTACTAATTTTCCTCCTCATCAAGAGTTTGGTCTTAATGGATGTATAAATCTTCCTGAGCTACCCAAATTTGTTGGTGAGGGAAATAACCATCAAATGTACTTAAAAGAGTTCAACTCTTCTATGGAGATTCATCATCAAAGGGATAATAATAATAATAACAATGATGGACCAATTGAGCATTGTAGTATCAATACTTTTGAGTTGCCACCATTACCGGGTGATGAAGAAGCCTCACATCATCATCATCATCATCAACATTTGATGTGGTCAAATGATAACAATCCTGAGATGATAATGGTGAACCATGATGCCTTTCATGATCAAGTAGCCACACATCATCATCATCATCCACCACTTTTTGGGAGTGAAGCTCATCATGATGCTGACTTGTTAATTGGTAATTGGAGCCCCTTTGATTTGCCATCATCAAATGATGCTTCTTCATTTTCTAGGCATCGGTGA 981 0.4016 MESVWKPNVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTLRQSLEGLNFKNSSSSPSHDHTSNNPNPNPIIGHHHSNRSSSPVIADGPNIDLALVYANFLNQKPNSGDGVVENNNNNQDHHHHQLLQPVFDDPSLEDGPSSTNFPPHQEFGLNGCINLPELPKFVGEGNNHQMYLKEFNSSMEIHHQRDNNNNNNDGPIEHCSINTFELPPLPGDEEASHHHHHHQHLMWSNDNNPEMIMVNHDAFHDQVATHHHHHPPLFGSEAHHDADLLIGNWSPFDLPSSNDASSFSRHR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03154 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 318 IPR045174 GO:0003700|GO:0006355
Aip02g03154 326 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Aip02g03154 326 MobiDBLite consensus disorder prediction 78 116 - -
Aip02g03154 326 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
Aip02g03154 326 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Aip02g03154 326 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03154 Aip-Chr2 108181453 108182433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03154 4 315 C2C2-Dof Transcription Factor Family AT3G52440 38.050 5.38e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip02g03154 zf-Dof 5.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03154 - - adu:110277481 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03154 02 108181453 108182433 Aip02g03154 02 108181453 108182433 ECH