Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02265 ATGCAGGAGATACATTCAATGGGAGGCACCAGGTTCTTCGGCGCCGCTGCTGACAGGAGGCTCAGGCCACACCACCACCACCCTCACCAGAACACCGCCACCAACTGCCACCAGCAGCAAGCACTTAAATGTCCCCGTTGTGATTCACTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCCCAGCCACGCCACTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCTGTCGGTGGCGGTTGCCGCAAGTCCAAGCGTTCCAACGACAACAAGACCGCCAAAACCAGCAAAAATAATAATAGTAATAATAATAGCGCCACCGCAACTTCCTCCGCGGAAACGCCGCCGCAAACGACGTCGTCTCAGGCTCCACCGACGGACCAGAACTCCAATTCTCACTCCAGCAGTGAGAGCTCTAACCTCACCGCGGCGGCGGCGGCGGCGACCATCGGCACGACGGAGCTTAACTCTGATTCTTCCAAGTTGTTGATCCACGAGAATAACAACAACAACGCTTCCTCGAACCCTAATTTGGAGAGCGGTATTTTCTCTGAGATAGGGACGCTGACGAGCTTGATGGTTTCTTCCTCTTCGAACAACGATGCATTGGCGTTTGGATTTGGAGGTGGTGGTGTTGTTCCTGATGCGACGTCGTTTCAGTGGCATCAGCAGCAGAAGTTGCCGGAGAATCTGAACGGTAGTGGTGGGAGCTTGCTGGATCATCATGGACACGGTAGTACTGTAACCGTTGATTTGTCGGCACTTCCGAGCAAGACGGGAAACGGTGGATTTGGACCGTTGGATTGGCAAGCTGGTGTGGATCAAGGTTTGTTTGATCTCCCCAACTCCGTTGATCATGCTTACTGGAGTCAAACTCAATGGCCTGATCACGATAATTCTAATCTCTTTCATCTCCCCTGA 951 0.5321 MQEIHSMGGTRFFGAAADRRLRPHHHHPHQNTATNCHQQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNDNKTAKTSKNNNSNNNSATATSSAETPPQTTSSQAPPTDQNSNSHSSSESSNLTAAAAAATIGTTELNSDSSKLLIHENNNNNASSNPNLESGIFSEIGTLTSLMVSSSSNNDALAFGFGGGGVVPDATSFQWHQQQKLPENLNGSGGSLLDHHGHGSTVTVDLSALPSKTGNGGFGPLDWQAGVDQGLFDLPNSVDHAYWSQTQWPDHDNSNLFHLP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02265 316 MobiDBLite consensus disorder prediction 86 155 - -
Aip01g02265 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 303 IPR045174 GO:0003700|GO:0006355
Aip01g02265 316 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Aip01g02265 316 MobiDBLite consensus disorder prediction 103 155 - -
Aip01g02265 316 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Aip01g02265 316 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Aip01g02265 316 PANTHER DOF ZINC FINGER PROTEIN 4 25 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02265 Aip-Chr1 119388078 119389698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02265 18 316 C2C2-Dof Transcription Factor Family AT5G60850 41.118 8.71e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip01g02265 zf-Dof 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02265 - - adu:107468949 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02265 01 119388078 119389698 Aip01g02265 01 119388078 119389698 ECH