Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00352 ATGGGCAAATCGGCTCTTTGGGTCACCACATTCACCCTCGTGTTGACGGGCTTCCTGACGGCCCGGGCTCAGGCAGAGGCAAACTTCAAGTGCAGCAGCAATACAAACGCCACGTGTCGAGCTCTAATAGACTACTCTAGCCAGAATGCGACCACGCTCCGAGACATCCAGAAGCTGTTCAACGTGAAGCACCTCCCGGACCTATTGGGCGCAAACGCCAACACGATCCCGGAAAACGCGTCAGGCAGTTACAGCGTGGCGCCCAAGCAGGTAGTTAGGATTCCGTTTCCGTGCACGTGCAGTAACGGAACGGGGCTGTCGAACCACGTGCCGTTGTACAAGATCAAGCCTGGTGATGGCTTGGACGAAATGGCTCTCAAAGGTATGGCTCTGAAGATGTTATGTCTCAGAGATGAAGATTGCAAAACTATGACTTGTACCCCTGGCCCAAAGCCCTGCAGAAAGGAATGCTTTGCTGGACTTTGCGTTTGTAACTGCTAG 501 0.5369 MGKSALWVTTFTLVLTGFLTARAQAEANFKCSSNTNATCRALIDYSSQNATTLRDIQKLFNVKHLPDLLGANANTIPENASGSYSVAPKQVVRIPFPCTCSNGTGLSNHVPLYKIKPGDGLDEMALKGMALKMLCLRDEDCKTMTCTPGPKPCRKECFAGLCVCNC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00352 166 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 11 125 - -
Aip01g00352 166 PANTHER BNAC03G47500D PROTEIN 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00352 Aip-Chr1 3786805 3787558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00352 11 125 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 51.667 4.31e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00352 - - aip:107616171 345.51