Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2437 ATGGACAACCAACTTGACTCACAACCACCACCACAACCCGCGCGCTTAAAGCTATTTGGCTTCAGCGTCCATGAAGACTCCACCATGGAAGAAGAATTACTACTCATGCATGAAGACGTAGCAGATTCAACAACAAAACCATCACCTTCTTCCACCTCCCCCTCTAGGTCGCCGGATTCCGCCGGAGCCGCTGCAGGAGCCAGCGGCGGTTTTGCGTCCTCCTCTTCCGGGGAGCGGAAATACGAGTGTCAGTACTGTTGCAGAGAGTTCGCAAATTCACAAGCACTTGGTGGACACCAAAACGCGCACAAGAAAGAGCGTCAACAGCTCAAGCGAGCACAGTTACAAGCCACGCGAAACGCCGCCGCCGTTTCCTTCGTCAGAAACCCCATCATCTCCGCCTTCGCACCACCGCCGCACCTGCTTGCTCCGCCGGGGTCCATGGTCATGCCGGCGCCACCTCCATCGTGGGTGTACATGCCGCCGCGTGCAGCTCCTCCTCCGTTCCACGTGTCAGTATCTCACGGGTGCGTGTTCCCTTCGGCGAACAGCAGTAATAATAGTAGCAACTACAGTTACGGTAACGGTAACGGTAACAGTAACGGTAATTGTAGCATTAAAAATGGGGGTGTAGGGTTCCCCTATGGTGGCGGTGTAGGGGAACCGTCAAGTGCATTGTCAACGATGATGGGGTCGCAGATGCAAGTGCAGGTACAGGCCCGGGCCCACCATGGCAGGATGGACGGGTCCTCTTTGAGTAGGTTCTCCAAAGGAGATGGTGGGCCCAGTTTTGATGATTCATTGGGCTTGGACTTGCACCTTAGCCTTGCACCAGCTGCGCCGTAA 846 0.5556 MDNQLDSQPPPQPARLKLFGFSVHEDSTMEEELLLMHEDVADSTTKPSPSSTSPSRSPDSAGAAAGASGGFASSSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAAVSFVRNPIISAFAPPPHLLAPPGSMVMPAPPPSWVYMPPRAAPPPFHVSVSHGCVFPSANSSNNSSNYSYGNGNGNSNGNCSIKNGGVGFPYGGGVGEPSSALSTMMGSQMQVQVQARAHHGRMDGSSLSRFSKGDGGPSFDDSLGLDLHLSLAPAAP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2437 281 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Ahy9g2437 281 MobiDBLite consensus disorder prediction 1 20 - -
Ahy9g2437 281 MobiDBLite consensus disorder prediction 240 260 - -
Ahy9g2437 281 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
Ahy9g2437 281 PANTHER ZINC FINGER PROTEIN GIS3 10 281 - -
Ahy9g2437 281 MobiDBLite consensus disorder prediction 29 76 - -
Ahy9g2437 281 MobiDBLite consensus disorder prediction 43 59 - -
Ahy9g2437 281 Gene3D Classic Zinc Finger 71 130 - -
Ahy9g2437 281 PANTHER ZINC FINGER PROTEIN 5 10 281 IPR044299 GO:0010090
Ahy9g2437 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2437 Ahy-Chr9 113253802 113255227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2437 3 279 C2H2 Transcription Factor Family AT1G68360 43.793 6.63e-58 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3186 19 155020855 155022241 Ahy9g2437 9 113253802 113255227 hybridization