Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2429 ATGGCACTACTTTCTCAACATTCTAAAACCTCTACAGCGGTGACAGCTACTCTAGTGCTAGTAATAATAGCGCTCTATTACAAAAGATGGAAGAAGCAAAATCAAACCCTTCCACTGGTTGATGCTTTTTTTGAGAGACATGACCACCTTCAAATCAAGAGGTATAGTTATTCTGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGACGGACGCCATGTTGCAGTGAAGATCCTAAGTGAATTTAAAGGTGATGGTCAGGAGTTCATTAATGAAGTTGCAAGTATGAGCAGAACTTCTCATGTTAACATCGTTGCTCTTCTTGGCTTCTGCTTTGAAGGATCTAAGCGAGCTTTAGTTTACGAATTGATGCCTAATGGGTCTCTAGAGAAGTTAATTTATAATGAAAATTCTGTGATAGGGGATCGCCAATTGGATTGTCAAACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAGTATTTGCACAAGGGCTGCAATACAAAAATCCTGCATTTTGACATAAAGCCTCATAACATTCTGTTAGATGAAAAATTTTGTCCCAAAATTTCCGACTTTGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTATAGTATCAATATTTGGTGCTAGAGGAACTGCAGGCTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGCAGTATCACATAAGTCAGATGTTTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAACATCAAGGCTGAAGTTGATGTATCGAGTGAGATATATTTCCCTCATTGGATATACAATCGCCTTGTGTCAAATCAGGAGCTTGATCTGCAAAACATAAGAAATGAATGTGATAATGAGATGGTCAGAAAGATGACAATAGTGAGCTTATGGTGCATCCAAACCAATCCTTCAACTCGACCATCAATCAGTAAGGTGGTGGAAATGTTGGAAGGAAGTGCTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAAACTCTCCCTGA 1086 0.3895 MALLSQHSKTSTAVTATLVLVIIALYYKRWKKQNQTLPLVDAFFERHDHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSEFKGDGQEFINEVASMSRTSHVNIVALLGFCFEGSKRALVYELMPNGSLEKLIYNENSVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEKFCPKISDFGLAKVCTRKESIVSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGRRKNIKAEVDVSSEIYFPHWIYNRLVSNQELDLQNIRNECDNEMVRKMTIVSLWCIQTNPSTRPSISKVVEMLEGSAELLQLPPKPYWFSPSNSP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2429 361 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
Ahy9g2429 361 ProSiteProfiles Protein kinase domain profile. 65 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2429 361 Gene3D Phosphorylase Kinase; domain 1 42 139 - -
Ahy9g2429 361 SUPERFAMILY Protein kinase-like (PK-like) 48 340 IPR011009 -
Ahy9g2429 361 SMART serkin_6 65 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2429 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Ahy9g2429 361 Gene3D Transferase(Phosphotransferase) domain 1 140 351 - -
Ahy9g2429 361 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 361 IPR045874 GO:0004672
Ahy9g2429 361 Pfam Protein kinase domain 68 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2429 361 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2429 Ahy-Chr9 113192442 113193701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2429 11 352 Receptor kinase-like Gene Family AT4G18250 55.714 3.88e-130 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy9g2429 Pkinase 2.30E-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3196 19 155114573 155123010 Ahy9g2429 9 113192442 113193701 hybridization