Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy9g2415 | ATGCCAGAAATTCAATTGGGTACACACACTATCAGATCACATGGAACTAGTGTGGCAAGAATACATATGCATGACTGGTTTATTCTTTTGCTTCTTGTGATCATTGATGCTGTCTTGAATATAATAGAGCCATTCCATCGTTTTGTTGGACGGGATATGATGACAGACCTTAGCTACCCATTGAAAGATAATACTATTCCCTTTTGGGCAGTTCCGATCATTGCAATATTGTTGCCGCTGGTCATCTTTCTTATTTACTATTTCATTAGAAAGGATGTTTATGACTTTCACCATGCTATATTGGGCCTTCTATATTCAGTCCTCATTACTGCTGTGATAACTGATGCTATCAAAGATGGTGTTGGACGACCACGGCCAGATTTCTTCTGGCGTTGTTTTCCTAATGGAAAAGGGGTGTATGATCAAGTAACAACCGATGTTATGTGTACTGGAGATAAAAGTGTTATCAAGGAAGGGCACAAAAGCTTCCCAAGTGGACATACCTCCTGGTCCTTTGCTGGTCTTGTTTATCTGTCTTGGTATCTATCTGGAAAAGTTAGGGCGTTTGATCGTAGCGGTCACATTGCAAAGCTCTGTCTTGTTTTCTTTCCAATCCTCATGGCATCTATGGTTGCTGTCTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGGCCTAATAGGGTGGGGGCCTCATGCATATTTCCGGATGTTGGCTGAATCTCATAATGCCGCTCGACCCTCTTCCGCCAATAATGACAGCCAGCGAGTGCAGTCCTCTGAGCTTCAGGCAGTAACTTTGTATATCCCACCTCACCAGGAGGGAGATACACGAAGCAATAGCTGGGATTCAAGCCCCATGTTAGGCGCACCACAAAATGTCAGGACACACTGA | 909 | 0.4356 | MPEIQLGTHTIRSHGTSVARIHMHDWFILLLLVIIDAVLNIIEPFHRFVGRDMMTDLSYPLKDNTIPFWAVPIIAILLPLVIFLIYYFIRKDVYDFHHAILGLLYSVLITAVITDAIKDGVGRPRPDFFWRCFPNGKGVYDQVTTDVMCTGDKSVIKEGHKSFPSGHTSWSFAGLVYLSWYLSGKVRAFDRSGHIAKLCLVFFPILMASMVAVSRVDDYWHHWQDVFAGGLIGWGPHAYFRMLAESHNAARPSSANNDSQRVQSSELQAVTLYIPPHQEGDTRSNSWDSSPMLGAPQNVRTH* | 303 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy9g2415 | 302 | Gene3D | Phosphatidic acid phosphatase type 2/haloperoxidase | 19 | 273 | - | - | |
| Ahy9g2415 | 302 | CDD | PAP2_containing_1_like | 55 | 233 | - | - | |
| Ahy9g2415 | 302 | Pfam | PAP2 superfamily | 100 | 235 | IPR000326 | - | |
| Ahy9g2415 | 302 | MobiDBLite | consensus disorder prediction | 278 | 302 | - | - | |
| Ahy9g2415 | 302 | PANTHER | LIPID PHOSPHATE PHOSPHATASE | 1 | 279 | IPR043216 | GO:0006644 | |
| Ahy9g2415 | 302 | PANTHER | LIPID PHOSPHATE PHOSPHATASE 2 | 1 | 279 | - | - | |
| Ahy9g2415 | 302 | SMART | acid_phosph_2 | 101 | 241 | IPR000326 | - | |
| Ahy9g2415 | 302 | SUPERFAMILY | Acid phosphatase/Vanadium-dependent haloperoxidase | 21 | 240 | IPR036938 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy9g2415 | Ahy-Chr9 | 113024598 | 113029097 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy9g2415 | 1 | 270 | Lipid Metabolism Gene Families | AT1G15080 | 65.862 | 1.07e-136 | 387 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy19g3225 | 19 | 155399314 | 155404225 | Ahy9g2415 | 9 | 113024598 | 113029097 | hybridization |