Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2360 ATGGCAATCCAACATCACAATGACCAACTAGAACAACAACATCACCACCAACACGCTGTCCTCGATGCCCTTTACTGCGACGAAGGAAAGTGGGAAGAAGAGTTCTCAGGAGAGAGTGATGTCACAACAAACCACGACCATGAAGAAGATGATGATGGTGTCAACTTCAACTTGAACTTCCATTCCCTTGACCCTCTGCTCTTGTTGGAGCAGGACATGTTCTGGGAAGACGAAGAGCTCAACACTCTCTTCTCCAAAGAGAAGCTTGACCACGAAGCCTATTATAACAATGGCGATGATGTCATGAAAGCATTGGATCCTTCTTCTTCTTCTTCTGTGTGTATGGCTCGCCGTGAAGCAGTTGAATGGATGCTTAAGGTGAATGCTCATTACGGGTTCTCAGCTCTGACGGCAACACTTGCCGTTACTTATCTGGATAGGTTCCTCTTGAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAACTTGCCTCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTAGAAGATGCAAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTTCTGATTCTGTCCACCTTGAATTGGAAGATGCACCCTGTGACCCCACTCTCATTTCTAGATCACATTATAAGGAGGTTGGGACTCAAAACACATCTTCACTGGCAGTTCCTCAAGCGTTGTGAGAATCTTCTTCTGTCTTTGCTATTGGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTATTGGCCACTGCAACAATGCTGAATGTAATAGGCCAGATTCATCACAACACTGAGGGAGTGGAATACAAAAACCAGCTTCTTAGTGTTCTCAACATGAACAAGGAGAAGGTAGATGAATGTTATAAAGTCATAGTGGAGGTGACAAATAATAATAATAATGGTGGGAGGGGGAAGAAGAGAAAGTATGAGGAAATCCCTGGTAGCCCAAGTGGCGTAATTGATGCAGTGTTCAGCTCTGATGATGGTTCCAACGATTCGTGGGAAGTGGTGGTGGGGTCATCACCATCACAAGAGGAGCCTCAGGCTCAGCCTCTCTTGAAGAACAAGAAACAACAATTGAAATTGTCATCACTTAACAGGGTCATTGTCGGAATTGTTGGCACCACCCCATAA 1191 0.445 MAIQHHNDQLEQQHHHQHAVLDALYCDEGKWEEEFSGESDVTTNHDHEEDDDGVNFNLNFHSLDPLLLLEQDMFWEDEELNTLFSKEKLDHEAYYNNGDDVMKALDPSSSSSVCMARREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLASVTCISLAAKVEETQVPLLLDLQVEDAKYVFEAKTIQRMELLILSTLNWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCENLLLSLLLDSRFVGCLPSVLATATMLNVIGQIHHNTEGVEYKNQLLSVLNMNKEKVDECYKVIVEVTNNNNNGGRGKKRKYEEIPGSPSGVIDAVFSSDDGSNDSWEVVVGSSPSQEEPQAQPLLKNKKQQLKLSSLNRVIVGIVGTTP* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2360 396 Pfam Cyclin, N-terminal domain 115 216 IPR006671 -
Ahy9g2360 396 PANTHER CYCLINS 51 366 IPR039361 -
Ahy9g2360 396 Pfam Cyclin, C-terminal domain 219 328 IPR004367 -
Ahy9g2360 396 SUPERFAMILY Cyclin-like 102 217 IPR036915 -
Ahy9g2360 396 Gene3D - 115 217 - -
Ahy9g2360 396 SUPERFAMILY Cyclin-like 201 315 IPR036915 -
Ahy9g2360 396 CDD CYCLIN 117 209 IPR013763 -
Ahy9g2360 396 ProSitePatterns Cyclins signature. 117 148 IPR006671 -
Ahy9g2360 396 SMART Cyclin_C_2 219 347 IPR004367 -
Ahy9g2360 396 PANTHER CYCLIN D3.1 PROTEIN 51 366 - -
Ahy9g2360 396 SMART cyclin_7 122 210 IPR013763 -
Ahy9g2360 396 Gene3D - 218 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2360 Ahy-Chr9 112443718 112445670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2360 1 313 Core Cell Cycle Gene Families AT4G34160 54.633 5.54e-107 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3278 19 155886328 155888273 Ahy9g2360 9 112443718 112445670 hybridization
Ahy5g0604 5 7705357 7707861 Ahy9g2360 9 112443718 112445670 PCT