Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1481 ATGGACACAGCTCAGTGGCCACAGATTGTGGTGAAGCCAATAGAAGAGATAGTTGTGGGAACAAACACATCATCATGTCATCAATCAAAACCACCATCTTCTAATAATCTTGCATCAGAGAATAATAACAACAACAATACCATCAAGAAACCAAGGCCACAGAAAGAGCAAGCCCTAAACTGTCCAAGGTGCCATTCAACAAACACAAAGTTCTGTTACTACAACAACTACAGCCTTACACAACCAAGGTACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCCCTTAGGAACATCCCTGTTGGTGGTGGATCCAGAAAGAACAAGAGATCTTCTACTTCAATATCATCATCACCGTCACCGCCTTCACCCAACAAGAACATTAAGCTTATTGGTAAGGTAGTCCATGAAGGCCAAGATCTGAACTTGGCTTTTCCGTCTGATTTGGTTGTTCATCAACAAAACAATAACAACAACAATAATACTCTTTCTTCTTCTTCTTCTTCTTCAACTATTACTAGTACTGTTACTACTACTACTACTACTACACCACCCTCTTCTACTACTCAATTCTCAGCAATGGAGCTTCTTACTGGGATCACTTCAGCAAATTCAAGAGGGGGTTTGGGTTTGAACTCTTTCTTGCCTCATCATCCACCTGATCCAAACACAGTGCTGTACAATAATAGTACTTTTGCTCTTCAGGATTTCAATAAGACAGCAGGATTGAATTTCTCTTTGGATGGGATTGGGATTGGGATTGTAGGGAGTGGATTTGCAGGCCTTCATCATCATCAACAAGATCAGACAAGTGGTGGTGGGAATAATAATGGGAGACTTTTGTTTCCATTTGAGGATTTGAATCAGGTTTCTAACGCCGACGCAATTGATCATCAGAGTAATAGCAAGGTGCATCAACAAGGGGATTCAAGTGGATATTGGAGTGGGATGTTAGGTGGAGGATCATGGTAA 981 0.4139 MDTAQWPQIVVKPIEEIVVGTNTSSCHQSKPPSSNNLASENNNNNNTIKKPRPQKEQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSTSISSSPSPPSPNKNIKLIGKVVHEGQDLNLAFPSDLVVHQQNNNNNNNTLSSSSSSSTITSTVTTTTTTTPPSSTTQFSAMELLTGITSANSRGGLGLNSFLPHHPPDPNTVLYNNSTFALQDFNKTAGLNFSLDGIGIGIVGSGFAGLHHHQQDQTSGGGNNNGRLLFPFEDLNQVSNADAIDHQSNSKVHQQGDSSGYWSGMLGGGSW* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1481 326 MobiDBLite consensus disorder prediction 22 53 - -
Ahy9g1481 326 Pfam Dof domain, zinc finger 57 113 IPR003851 GO:0003677|GO:0006355
Ahy9g1481 326 MobiDBLite consensus disorder prediction 100 131 - -
Ahy9g1481 326 ProSitePatterns Zinc finger Dof-type signature. 61 97 IPR003851 GO:0003677|GO:0006355
Ahy9g1481 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 42 322 - -
Ahy9g1481 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 322 IPR045174 GO:0003700|GO:0006355
Ahy9g1481 326 MobiDBLite consensus disorder prediction 108 128 - -
Ahy9g1481 326 ProSiteProfiles Zinc finger Dof-type profile. 59 113 IPR003851 GO:0003677|GO:0006355
Ahy9g1481 326 MobiDBLite consensus disorder prediction 300 326 - -
Ahy9g1481 326 MobiDBLite consensus disorder prediction 155 192 - -
Ahy9g1481 326 MobiDBLite consensus disorder prediction 22 58 - -
Ahy9g1481 326 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1481 Ahy-Chr9 75365377 75367724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1481 1 326 C2C2-Dof Transcription Factor Family AT4G24060 39.722 8.36e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy9g1481 zf-Dof 4.80E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1481 - - adu:107465965 568.926