Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0426 ATGCAAGATCCAACAACAGTATTCCAAATCCAACAAGCCTTGTTGAAACAACCACACTTCCCAGAACAAGAACAACAACTAAAGTGTCCAAGGTGTGAATCCACAAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCACGCCATTACTGCAAGAATTGCAGAAGGTATTGGACCAAAGGTGGCGCCTTGAGGAACATACCCGTTGGTGGTGGAACCAGAAAGACCCACAAACGTTCTTCTTCATCTTCTTCATCTTCCACTTCAAATTCATCCATCAAACGCCCTTCATCATCATCATCATCACAACAAGCCAATTCTATTACTACTAATAGTAATAATAGCGTTATTTGTTCCGGGTCTGATTCGACCCGGACTTGCACCGACCCGGTTGGTCAAGATCAGAGGGTGTTGAACATTGGTGGTAGCTTTAGTTCACTATTGGGAACAGATGGACCTTTTGGGGGGATTTTAGAGGGTGTAAATTCAAATGGGTCAGAGCTGAAAATTGGTGAATTTGGTGGTGGGATTGGGAATGTGGGTTCTGGATTGGTCGCGAATCCGAATTCAGGTCGAAACCCGGGTTTGGATATTCAGAATAATGGTGATTCAAGCTATTGGAATAATGGTGGTGGTCATGGTTGGTCTGATCTTGCAATATACACACCTGGGTCAAGCTTTCAGTAG 696 0.4397 MQDPTTVFQIQQALLKQPHFPEQEQQLKCPRCESTNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPVGGGTRKTHKRSSSSSSSSTSNSSIKRPSSSSSSQQANSITTNSNNSVICSGSDSTRTCTDPVGQDQRVLNIGGSFSSLLGTDGPFGGILEGVNSNGSELKIGEFGGGIGNVGSGLVANPNSGRNPGLDIQNNGDSSYWNNGGGHGWSDLAIYTPGSSFQ* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0426 231 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Ahy9g0426 231 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 230 IPR045174 GO:0003700|GO:0006355
Ahy9g0426 231 PANTHER DOF ZINC FINGER PROTEIN DOF1.7 17 230 - -
Ahy9g0426 231 MobiDBLite consensus disorder prediction 78 118 - -
Ahy9g0426 231 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Ahy9g0426 231 MobiDBLite consensus disorder prediction 68 118 - -
Ahy9g0426 231 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0426 Ahy-Chr9 5094973 5096978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0426 1 161 C2C2-Dof Transcription Factor Family AT1G51700 50.581 3.78e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy9g0426 zf-Dof 1.50E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0426 - - aip:107619380 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0214 18 1694607 1696471 Ahy9g0426 9 5094973 5096978 PCT
Ahy9g0426 9 5094973 5096978 Ahy18g0214 18 1694607 1696471 PCT