Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2796 ATGAAGATGGTAGATAACAAGGACCCTGCAATTACTCTCTTTGGGAAGAAGATTCCCTTTCCCGGTGAAGCTGCTCTCAATGCCGCGGAATTAGAGGATGATGAGGTGGACAAACAAGTAGGACACAAGGATGGTGGAGCTGATGAAGTTACTGAGAAAAAGAAAGAGGCTGATCCTTCTCGAAATGGAAATGCAGAGATCAATAAAAGAAAGGATTGGAGTGTTCAGAACCCAAAAACACCATCCATAGAGGAAGAAAGTGCAAAAATAAAGAAGGAGCAAAGCGATGCAGAGCAAGAGAAGGCAGTGAAGAAGCCGGATAAAGTGCTTCCATGTCCGCGCTGCAATAGCATGGACACCAAGTTCTGCTACTACAACAACTACAACGTCAACCAGCCGCGCTACTTCTGCAAGGCGTGCCAAAGATACTGGACTGCAGGCGGCGCCATGAGGAACGTGCCAGTTGGGGCAGGCAGGAGAAAGAACAAGAACAGCGCCAGCGCCTCCCACTATCGCCACATCACCATCTCTGATGGGACCTTGAAATCCAGTGGCAGAGTCCTCAGCTTTGGATTGGATACACCACCACCACCCATATGTGATTCCATGGCGTCTGTCCTCAACGGTTTTCATGGAATTGAGGATCAAAGTGGAGAAAATGGCGATGACTGCTCGAGTGGATCTTCCATTACCATGGAGGAAACAGGAAAAACCGCATCCCAAAAGCCTTTAGCACAAAGCCCTCCCCAAGTCCCATGCATTCCTAGTGTTCCTTGGCCTTATCCCTGGAATTCTGCTCTGTGTCCTCCTGGATTTCCCATTTCATTCTACCCGGCACCTTTTTGGAATTGGAATGTTCCGTGGTTCCCCTCACATCCATCTACTCTAGGGAAGCACTCCAGGGATGATGCTGATGATGACACGGTCAAGCAAGACTATAGGCAAAAGGAAGAACCTCCAAGGCAGAGAAATGGGTGTGTTTTGGTTCCCAAAACTTTAAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATCAAGAATGAATGTGTCATTGGGGGTGGAATGTTTAAGGCTTTCCAATCAAACAAGGAAGAGAAGAATAAAGTGGTTGAAACCTCGCCAGTGTTGCTGGCTAACCCTGCAGCCTTGTCTAGATCCCTTCATTTTCATGAGAACTCATGA 1203 0.4738 MKMVDNKDPAITLFGKKIPFPGEAALNAAELEDDEVDKQVGHKDGGADEVTEKKKEADPSRNGNAEINKRKDWSVQNPKTPSIEEESAKIKKEQSDAEQEKAVKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGAMRNVPVGAGRRKNKNSASASHYRHITISDGTLKSSGRVLSFGLDTPPPPICDSMASVLNGFHGIEDQSGENGDDCSSGSSITMEETGKTASQKPLAQSPPQVPCIPSVPWPYPWNSALCPPGFPISFYPAPFWNWNVPWFPSHPSTLGKHSRDDADDDTVKQDYRQKEEPPRQRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNECVIGGGMFKAFQSNKEEKNKVVETSPVLLANPAALSRSLHFHENS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2796 400 MobiDBLite consensus disorder prediction 295 322 - -
Ahy8g2796 400 MobiDBLite consensus disorder prediction 296 321 - -
Ahy8g2796 400 MobiDBLite consensus disorder prediction 69 83 - -
Ahy8g2796 400 MobiDBLite consensus disorder prediction 30 106 - -
Ahy8g2796 400 PANTHER CYCLIC DOF FACTOR 1 3 399 - -
Ahy8g2796 400 Coils Coil 83 103 - -
Ahy8g2796 400 MobiDBLite consensus disorder prediction 214 249 - -
Ahy8g2796 400 Pfam Dof domain, zinc finger 107 164 IPR003851 GO:0003677|GO:0006355
Ahy8g2796 400 MobiDBLite consensus disorder prediction 84 106 - -
Ahy8g2796 400 MobiDBLite consensus disorder prediction 219 247 - -
Ahy8g2796 400 MobiDBLite consensus disorder prediction 31 68 - -
Ahy8g2796 400 ProSitePatterns Zinc finger Dof-type signature. 112 148 IPR003851 GO:0003677|GO:0006355
Ahy8g2796 400 PANTHER CYCLIC DOF FACTOR 2 3 399 IPR045174 GO:0003700|GO:0006355
Ahy8g2796 400 ProSiteProfiles Zinc finger Dof-type profile. 110 164 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2796 Ahy-Chr8 51419477 51421821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2796 3 398 C2C2-Dof Transcription Factor Family AT3G47500 46.352 2.16e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy8g2796 zf-Dof 2.00E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2796 - - aip:107629495 803.512