Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2636 ATGGAAGGGATAGGTCCCAACAACAATTCATGCACAACAAGGCCTCATAATGAAGGTGGTGGTGGAAATAACAACAACAATTTAGAGAAGAAAGCAAGACCACAAGAGCAATTGAATTGTCCAAGGTGCAATTCAACAAACACAAAGTTTTGCTACTACAACAACTATAGCCTCACACAACCAAGGTATTTTTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTCAGGAATGTTCCTGTTGGTGGAGGTTCAAGGAAGAACAAGATCAAGATCAATACCAATAACAACTCTTCGTCATCGTCGTCAACAACATCAACACCTTCATCAAATTCAAAGGTTCTTGTTCATCAAGACCTACTAAACCCTAATAATAATAGGGTTATTCAAGGACAAGATCTTAATCTTGCTTTCCCATCTATGGATCATCACAACAATTATCATCATGGTTTGTTACCATTTATTGATATGGCTAATAATAATAATAATAATAATAATAATAATAGTAATGGTGATGCACCAAGTTCTCTTTCAGCTTTGGAGCTTTTAAGGTCAAGCATGGCTTCTAGGGGTTTGAGTAATCCATATTATGCTTCTTCTAATTCTTCATTGGTACCATCAAATTCATCAAGTGTAATTTACCCTACTTCTGGATTAGGGTTTCCAACCATGCAAGAAGTAGTTAATAATAATAAGCAAAATAGTGGTAACCTTGGATTTTCATCTTCTTCATCAATTATGGATCATCAACATCATGAAGAGAATATTGTTAATAATAGTGATGGTGGAGGAAGAGTTCTTTTCCCTTTTGGAGAGGTGATGAAGAGTGCTGAAGAAAACAACAACAAAGAACAAGGGAATAATTCATCAAGCACTGCCAATGGTGGATATTGGAATGGAATGATGGGTCAAGGGTCATGGTGA 930 0.3667 MEGIGPNNNSCTTRPHNEGGGGNNNNNLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKIKINTNNNSSSSSSTTSTPSSNSKVLVHQDLLNPNNNRVIQGQDLNLAFPSMDHHNNYHHGLLPFIDMANNNNNNNNNNSNGDAPSSLSALELLRSSMASRGLSNPYYASSNSSLVPSNSSSVIYPTSGLGFPTMQEVVNNNKQNSGNLGFSSSSSIMDHQHHEENIVNNSDGGGRVLFPFGEVMKSAEENNNKEQGNNSSSTANGGYWNGMMGQGSW* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2636 309 MobiDBLite consensus disorder prediction 282 301 - -
Ahy8g2636 309 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Ahy8g2636 309 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 16 305 - -
Ahy8g2636 309 MobiDBLite consensus disorder prediction 79 114 - -
Ahy8g2636 309 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Ahy8g2636 309 MobiDBLite consensus disorder prediction 281 301 - -
Ahy8g2636 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 305 IPR045174 GO:0003700|GO:0006355
Ahy8g2636 309 Pfam Dof domain, zinc finger 36 91 IPR003851 GO:0003677|GO:0006355
Ahy8g2636 309 MobiDBLite consensus disorder prediction 1 39 - -
Ahy8g2636 309 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2636 Ahy-Chr8 49590824 49593071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2636 30 309 C2C2-Dof Transcription Factor Family AT3G61850 45.485 1.27e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy8g2636 zf-Dof 6.70E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2636 - - aip:107623806 525.013