Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1263 ATGGATCCTTCTAGTGGACAACACCATCAGGAACTGGAGAACATGATAGGATGCTCCACAAAGAGTCAGCAACAAGAGAGAAAGCCAAGGCCACAACCAGAACAAGCACTCAAATGTCCAAGATGTGACTCTACCAACACCAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAATCTTGCAGAAGATACTGGACCAAAGGTGGAACACTCAGGAATGTTCCTGTTGGTGGTGGATGCAGGAAGAACAAGAGATCTTCTAATTCTTCTTCTTCATCAACTACTTCCTCTTCATCTAATTCACCTGCACCCTCTTCAAGGAGGCCTCAAGATCATCATGGATTCATCTCACCTAATAATCCTCTTATCACTTCTTTCCCTCACTTGGCTTATGATCATCATCCTTCTTCTTCTCCTACCAGTGATCTCACCTTAGCCCTTGCAAGGCTCCAGAAACAAACAATGCCTTTTGATGATCATGATCTCTCAATCTTGGGCAACCCCACAAGCTCCCTTTGTGATATTCTTGGAAATCAAGGCCTTAACACCCACAACACTTCATCAACTGGCTTCTTGGAAGCACTTAGAACCGGATTCCAAGGAAACAATAGTAATAATAACGCTCTTCATCATCAGAATCTCTACTATTCATATGGGAATGGGGACATGGGTGAGGTTGTGGACAATGGTGCTGTTAATGCTGGAGACATGTTGCTACCTAATCATTATGATTCAGAGATGAGCAATGCAGCAACTCAAGCAGTGAGTGTCAGCACCATGAAGCAAGAACTATGCAGTGAAGCTACTAAGGTTCTTGGTGGTGGCGCTTTTCCATGGCATAACAGTAGTAATGGGGACACAAACATGGGTGAATTTGATTCAGCAAGAGCTACTTGGAATGCTGGTTTCACATCTTCAAATTGGCATGGCCTTCTCCATAGTCCTCTAATGTAA 972 0.4372 MDPSSGQHHQELENMIGCSTKSQQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSNSSSSSTTSSSSNSPAPSSRRPQDHHGFISPNNPLITSFPHLAYDHHPSSSPTSDLTLALARLQKQTMPFDDHDLSILGNPTSSLCDILGNQGLNTHNTSSTGFLEALRTGFQGNNSNNNALHHQNLYYSYGNGDMGEVVDNGAVNAGDMLLPNHYDSEMSNAATQAVSVSTMKQELCSEATKVLGGGAFPWHNSSNGDTNMGEFDSARATWNAGFTSSNWHGLLHSPLM* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1263 323 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 322 IPR045174 GO:0003700|GO:0006355
Ahy8g1263 323 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Ahy8g1263 323 MobiDBLite consensus disorder prediction 1 26 - -
Ahy8g1263 323 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 6 322 - -
Ahy8g1263 323 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Ahy8g1263 323 MobiDBLite consensus disorder prediction 1 38 - -
Ahy8g1263 323 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Ahy8g1263 323 MobiDBLite consensus disorder prediction 81 125 - -
Ahy8g1263 323 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1263 Ahy-Chr8 28190651 28192241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1263 1 197 C2C2-Dof Transcription Factor Family AT3G45610 46.829 1.67e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy8g1263 zf-Dof 6.90E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1263 - - aip:107612899 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0457 18 4010813 4012484 Ahy8g1263 8 28190651 28192241 hybridization
Ahy8g1263 8 28190651 28192241 Ahy13g0384 13 3884185 3885597 PCT
Ahy13g0384 13 3884185 3885597 Ahy8g1263 8 28190651 28192241 PCT