Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1205 ATGGTTTTCCCTTCAATCCCAGTGTATTTAGATCCTCCCAGTTGGCACCACCAGCAGCAGCAGGCAAATGGCAATGGCAATGAGAGTTCAACTCAGGTGGTTCCGAGATCGGGATCAGAGGGAGCACTCAAGTGTCCTCGGTGCGAATCAAGCAACACAAAGTTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCGCGACACTTCTGCAAGACGTGTAGGCGTTACTGGACAAGAGGCGGTGCTCTTAGGAACGTTCCGGTTGGTGGTGGTTTCCGGAGAAACAAGAAGACCAAGAGGAGTAGCAGTAGCCGCCCAGGAGGAAACACTGAAAAGCAGTCAACATCAACATCATCACTTCCTTCCGGTTTTAACCCAGGTTTCATGGCTTCTCTTGAGAACATGACCCTCTATGGAGGAGGATTGCATCAGCATCAGCATCAGCAGCAGTTTCCTAATTTCTTGAGTGGTTTTGATCCAACTACCACTTCTTCTTCGTTCCCTTTCCTGTTTGGAGAATCTAGGGTTAAATTGGAATCTGGAAACGGAGGGCTATTAAGTAATAGTTTGTCAGAGAACTATTCATGGACTGATCTTGCAGCTGCATCTTCTTCCGCTGCTCATCATCTCTTGTGA 636 0.4796 MVFPSIPVYLDPPSWHHQQQQANGNGNESSTQVVPRSGSEGALKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKKTKRSSSSRPGGNTEKQSTSTSSLPSGFNPGFMASLENMTLYGGGLHQHQHQQQFPNFLSGFDPTTTSSSFPFLFGESRVKLESGNGGLLSNSLSENYSWTDLAAASSSAAHHLL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1205 211 Pfam Dof domain, zinc finger 42 97 IPR003851 GO:0003677|GO:0006355
Ahy8g1205 211 MobiDBLite consensus disorder prediction 87 123 - -
Ahy8g1205 211 MobiDBLite consensus disorder prediction 102 123 - -
Ahy8g1205 211 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Ahy8g1205 211 PANTHER DOF ZINC FINGER PROTEIN DOF2.4-LIKE 32 157 - -
Ahy8g1205 211 MobiDBLite consensus disorder prediction 14 37 - -
Ahy8g1205 211 MobiDBLite consensus disorder prediction 13 44 - -
Ahy8g1205 211 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Ahy8g1205 211 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 157 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1205 Ahy-Chr8 27422286 27423716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1205 40 99 C2C2-Dof Transcription Factor Family AT2G37590 90.000 2.06e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy8g1205 zf-Dof 1.90E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1205 - - adu:107461669 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0400 18 3413945 3415281 Ahy8g1205 8 27422286 27423716 hybridization
Ahy8g1205 8 27422286 27423716 Ahy13g0452 13 4646577 4648241 PCT
Ahy13g0452 13 4646577 4648241 Ahy8g1205 8 27422286 27423716 PCT