Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0354 ATGGCCTTATCAAGCTCATATATACAAAGATTCCTCTTGGGCAAGCTCCATAGCCGCTTCTCCTCCAACCACAGAAACCCCTTTGCTGCTGTTACATGCACAAGCAGGTGCTACTCTGCCATTGCCATTGATGCACCTTCATCTTTAGCTGAGGCTCCTGGTGTAAGATGGGGATCCATAGCTTTGCAGGGTTTAAGGGAAGAGATGGAGGATGATATCATTGTTCGCCCTGATGGCCTTCATGGATTCTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGCTTCTCTTCTGTTGAGTTCCTCAGTGCAAACCATAGGGATGAGCTCTACAAGGAGTGTCTTGAAGCCTTACAAGGTGGGTTAGTATTGGTTGAGAAAGATTTCAAAGCCACTAAAGAAGCATTAGAGCAAGCATTTGCCAAAGCTGATGCCAAGTTGTTAAAATGGCTTGAAATGAAGGGAGAGGAGGACGAATCGGGCGCAACAGCAACTGCAGTGTTCATAGGGGACGATACGCTGCTCGTTTCACACATTGGCGACTCATCTGTGGTTCTATCTAGAGCTGGAAAAGCAGAAATGGTTACTAGTCCTCACAGACCATATGGGAGCAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTGAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTCGGGGACTTAAGATACAAAACAAAGAAGAATGAGATGCTACAAAAAGGAGTTCAAGAAGGACGATGGTCAGAAAAGTTTATTTCTCGGGTACGGCTCAACAATGATTTAGTTGTTGCATATCCTGATATTTATCAAGTAGATCTTGGCTCAGATGCTGAGTTTATAGTATTAGCATCAGATGGCTTATGGGATTATATGAGCAGCTCAGATGCAGTTTCCTTTGTGAGGGAACAGTTACAAAAGCATGGAAACATTCAGGTAGCCTGTGAAGCACTTGCACAAGCAGCTATGTTGATGATTGCAGGAAGACAGATTGGGAGAATGTGGCAGTGCAGCAACAAAATATGGTATTGGAGCTGCTTCAAGCCCTTGCTACCATTGGTATTGTGTCCATTGGAATTTGGTTTTCGTCTCAGCTTTCATTATAGATTCACAAAAGATAAAAAAATAAAATACCAGTGA 1170 0.4333 MALSSSYIQRFLLGKLHSRFSSNHRNPFAAVTCTSRCYSAIAIDAPSSLAEAPGVRWGSIALQGLREEMEDDIIVRPDGLHGFSFAAVFDGHGGFSSVEFLSANHRDELYKECLEALQGGLVLVEKDFKATKEALEQAFAKADAKLLKWLEMKGEEDESGATATAVFIGDDTLLVSHIGDSSVVLSRAGKAEMVTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDLRYKTKKNEMLQKGVQEGRWSEKFISRVRLNNDLVVAYPDIYQVDLGSDAEFIVLASDGLWDYMSSSDAVSFVREQLQKHGNIQVACEALAQAAMLMIAGRQIGRMWQCSNKIWYWSCFKPLLPLVLCPLEFGFRLSFHYRFTKDKKIKYQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0354 389 Pfam Protein phosphatase 2C 58 335 IPR001932 -
Ahy8g0354 389 PANTHER PROTEIN PHOSPHATASE 2C 10 336 IPR015655 GO:0004722|GO:0006470
Ahy8g0354 389 CDD PP2Cc 63 333 IPR001932 -
Ahy8g0354 389 Gene3D - 55 340 IPR036457 -
Ahy8g0354 389 SUPERFAMILY PP2C-like 49 334 IPR036457 -
Ahy8g0354 389 PANTHER PROTEIN PHOSPHATASE 2C 57 10 336 - -
Ahy8g0354 389 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Ahy8g0354 389 ProSiteProfiles PPM-type phosphatase domain profile. 56 389 IPR001932 -
Ahy8g0354 389 SMART PP2C_4 46 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0354 Ahy-Chr8 7345142 7347820 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2565 17 121300981 121304176 Ahy8g0354 8 7345142 7347820 hybridization
Ahy8g0354 8 7345142 7347820 Ahy16g3598 16 153613458 153615674 PCT
Ahy8g0354 8 7345142 7347820 Ahy6g2843 6 114309453 114311669 PCT