Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0051 ATGGATTCAACTTGTGCAGCACTGAGTGCCACCAATCTAGTTCAACTTAGTAACAAAGTTGGAAGAAACAGAGCAACTCTGTTCTGGGGTGAATCTAAAATAGCACCTCAAATAAGAACAACAACAACGTTGTTGAGTGTTCAATCATCCAAGCCTGCAACTGCACACGCTGTTCTCACATCAGATGTGAATCAAGAGTCCACGGAGGAACATAATTTTGAAACCCTTGAAGCAGACCCAAAAGGTGTAGCTTCTATCATTTTGGGTGGAGGTGCTGGAACTCGCCTCTTTCCTCTTACTGGCAGAAGAGCCAAACCTGCGGTTCCAATAGGAGGGTGTTATAGACTCATTGATATCCCTATGAGCAATTGCATCAATAGTGGCATCAAGAAAATATTCATTTTAACTCAGTTCAACTCTTTCTCCCTCAATCGTCACTTGTCTCGCTTATACAGCTTTGGAAATGGCCTCAGTTTTGGGGATGGTTTTGTGGAGGTCTTGGCTGCAACTCAAACACCTGGAGAAACAGGGAAGAAATGGTTCCAAGGGACAGCTGATGCCGTGAGGCAATTTATATGGGTCTTTGAGGATGCCAAGAACAAGAATATTGAGAATATATTGATACTTTCTGGTGATCATCTTTACCGAATGGACTATATGGACTTTGTTCAGAAACATATCGACACAAATGCTGATATCACAGTTTCGTGTGTGCCCATGGATGATAGCCGCGCATCAGACTATGGGCTGATGAAAATTGATAAAACAGGACGGATTGTACAGTTTGCAGAAAAGCCAAAGGGATCTGATCTGAAGGAAATGAAAGTTGACACCACTGTCCTCGGGTTATCTGCAGAAGAAGCAAAGAAACATCCTTACATTGCATCAATGGGTGTCTATGTCTTTAGAACTGAAACCCTCCTGAAACTACTAAGATGGAGCTGTTCTTCGTGCAATGACTTTGGATCTGAAATAATCCCATCTGCTGTGAAAGATCACAATGTCCAGGCATATTTGTTTAATGATTACTGGGAAGATATTGGAACTATAAAGTCCTTCTTCGACGCAAATTTGGCCCTTACAGAGCAGCCTCCAAAATTTGAATTCTATGATCCAAAGACTCCTTTCTTCACTTCCCCAAGGTTCCTACCACCCACTAAAGTAGAAAAATGCAAGATCGTGGATGCAATTATTTCTCATGGGTGCTTCTTGAGGGAGTGCAGCGTTCAACATTCAATTGTTGGGGTGCGCTCACGTCTAGAGTCCGGTGTGGAGCTTAAGGATACCATGATGATGGGTGCTGATTATTATCAAACTGAGTCTGAAATTGCATCCTTTCTAGCAGAAGGAAAGGTTCCAATTGGTGTGGGAGAGAATACCAAAATCAGGAATTGTATCATTGACAAGAATGCCAAGATAGGAAGAAATGTGATTATTGCAAATGGTGATGGTGTGGAAGAAGCAGACAGGCCTAATGAAGGATTCTACATTAGGTCTGGCATCACAGTTGTTCTAAAAAATGCAACAATCAAAGATGGAACAGTAATATGA 1551 0.4191 MDSTCAALSATNLVQLSNKVGRNRATLFWGESKIAPQIRTTTTLLSVQSSKPATAHAVLTSDVNQESTEEHNFETLEADPKGVASIILGGGAGTRLFPLTGRRAKPAVPIGGCYRLIDIPMSNCINSGIKKIFILTQFNSFSLNRHLSRLYSFGNGLSFGDGFVEVLAATQTPGETGKKWFQGTADAVRQFIWVFEDAKNKNIENILILSGDHLYRMDYMDFVQKHIDTNADITVSCVPMDDSRASDYGLMKIDKTGRIVQFAEKPKGSDLKEMKVDTTVLGLSAEEAKKHPYIASMGVYVFRTETLLKLLRWSCSSCNDFGSEIIPSAVKDHNVQAYLFNDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRFLPPTKVEKCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVELKDTMMMGADYYQTESEIASFLAEGKVPIGVGENTKIRNCIIDKNAKIGRNVIIANGDGVEEADRPNEGFYIRSGITVVLKNATIKDGTVI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0051 516 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 295 305 IPR005836 GO:0005978|GO:0008878
Ahy8g0051 516 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 65 381 IPR029044 -
Ahy8g0051 516 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 180 188 IPR005836 GO:0005978|GO:0008878
Ahy8g0051 516 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 516 IPR011831 GO:0005978|GO:0008878
Ahy8g0051 516 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 516 - -
Ahy8g0051 516 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 84 480 IPR011831 GO:0005978|GO:0008878
Ahy8g0051 516 Gene3D Hexapeptide repeat proteins 382 516 - -
Ahy8g0051 516 CDD ADP_Glucose_PP 86 347 - -
Ahy8g0051 516 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 89 108 IPR005836 GO:0005978|GO:0008878
Ahy8g0051 516 Pfam Nucleotidyl transferase 85 362 IPR005835 GO:0009058|GO:0016779
Ahy8g0051 516 CDD LbH_G1P_AT_C 384 510 - -
Ahy8g0051 516 SUPERFAMILY Trimeric LpxA-like enzymes 378 516 IPR011004 -
Ahy8g0051 516 SUPERFAMILY Nucleotide-diphospho-sugar transferases 85 477 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0051 Ahy-Chr8 807804 812731 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2375 17 114330965 114336140 Ahy8g0051 8 807804 812731 hybridization
Ahy16g3677 16 154694057 154699328 Ahy8g0051 8 807804 812731 PCT
Ahy6g2924 6 115390052 115395323 Ahy8g0051 8 807804 812731 PCT
Ahy8g0051 8 807804 812731 Ahy16g3677 16 154694057 154699328 PCT
Ahy8g0051 8 807804 812731 Ahy6g2924 6 115390052 115395323 PCT