Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1918 ATGGCCCTGCAGATGACGTGGCAGCCGAACCTCCTGAGCCAAAAGCGCAAGAGCGGTCCTCCATTAGGTCTTCGCAACCTCGGCAATTCTTGCTACCTCAACAGCGTTCTCCAGTGCCTCACCTACACTCCCCCTCTCGCTAATTTCTGCCTCCGCTTCCAACACTCTTCCCTCTGTGATTCTTCTTCTTCTTCCTCCTCTAATTCGAATTCATCGAATTGTCCGTTCTGTATTCTCGAGAAGCAGATTGCGAAGTCCCTGCGCGTGGATCTCACGCACGACGCGCCGTTGAAGATTCAGAGCTGCCTCCGGATCTTCGCCGAGCACTTCCGGTGCGGCCGACAGGAGGACGCGCACGAGTTCCTGCGATACGTAATCGACGCCTGCCACAACACCTGCCTCCGCCTCAAGAAGCTCCGCCGCGGCGGAGATGGTGGTGCTGAGAACGGAGCCGGAGGTGGGAGCTCAACGGTGGTGAAGGAGATTTTCGGCGGTGCGCTGCAGAGCCAGGTGAAGTGCCTGTGCTGTGGTTATGAGTCGAATAAGGTCGATGAGATAATGGATATTAGCCTTGATGTTTTCCATAGTAACTCGCTTAGAGATTCAATGCAAAAGTTCTTCCGGCCTGAGGTTTTAGATGGGAACAATAAGTACAAATGTGATAGTTGTAAGAAATTAGTGCCGGCAAAGAAGCAGATGAGTATACTCCAAGCGCCTAATATTCTTGTTATACAGCTCAAGAGATTTGAGGGCATATTGGGGGGCAAGATTGATAAGGCTGTTGCATTTGAAGAGGTTTTGTTACTTTCTAGCTTCATGTGCAAAGCGAGTCAGGATCCACTACCAGAATATAAGCTTTTTGGTACTATTGTGCATTCAGGCTACTCCCCGGAGTCTGGTCACTATTATGCCTACATAAAGGATGCAATGGGTCGATGGTATTGTTGTGATGATTCTTGTGTAACAGTTGCAAGTTTGCAAGAAGTTTTGTCAGAGAAGGTTTATATTCTTTTTTTCTCTCGAACTACTCAAAGGCCAGCGTTAGTTAATGATTCTCTTGTTTCCAATGGCGTAAAGCCTCATCACTCGAATGGGAGTCAGGCATCTGAAAGTGCAAAGGTTGAGGCACCATTGAAAGCAGTGCATTCAAAATCAAATTCTGAGCAATCTACTTGGAAGGATATGCCAAGGGTATCTAAAATTAGTAAAGGGCCTTCTAGCTCAAGAGTGAAGTTTGACATTAATGGAAATTCTGCTTCCAAGAGAAGTCCTGCTCATGCAACTGTCAATGGGAAAGTGGACATTTCTAAGAATCAGCTTGTGGTAATTAATGGGCATGTGAAGGACACAGTTTCTTTGGAGAATGATCCAACGGTAGACAATAATAGAAGCACGGTAACAACAGGTAAGGGGCCAGAAAACTTTAAGCAAGAAAGCAATGGCCACGGTGAACCTAAAATATTGGGGAAGAGGAAAGTACAGGATACTTCAAGCATTTTGCTTGCACATGATGGTCAATCTCGAACAGAAGTTGAAGAGCTGAAAGACATTCTTGCAAAAGAAGCCAAGTCTGTTTTGAGGTCATGTGGCTGGACAGAAAACGTTTTTAACTTCATGCGATCTAGAAAGAGGTTACGAGCACAAGAAGCTGGTCATATAACAGGTGCAGACGAGATAAGGAGGTCATTAATAAGAGATGCGAAGGGAGCTTTCTTATCTAAGATTCCTGAGTCACTGAGGAAGGATCTGATTGAACGTCTCCGGTCGTTTAGCCAAGATAAATAG 1785 0.4605 MALQMTWQPNLLSQKRKSGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRFQHSSLCDSSSSSSSNSNSSNCPFCILEKQIAKSLRVDLTHDAPLKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRGGDGGAENGAGGGSSTVVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLRDSMQKFFRPEVLDGNNKYKCDSCKKLVPAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLLLSSFMCKASQDPLPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVASLQEVLSEKVYILFFSRTTQRPALVNDSLVSNGVKPHHSNGSQASESAKVEAPLKAVHSKSNSEQSTWKDMPRVSKISKGPSSSRVKFDINGNSASKRSPAHATVNGKVDISKNQLVVINGHVKDTVSLENDPTVDNNRSTVTTGKGPENFKQESNGHGEPKILGKRKVQDTSSILLAHDGQSRTEVEELKDILAKEAKSVLRSCGWTENVFNFMRSRKRLRAQEAGHITGADEIRRSLIRDAKGAFLSKIPESLRKDLIERLRSFSQDK* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1918 594 MobiDBLite consensus disorder prediction 454 475 - -
Ahy7g1918 594 MobiDBLite consensus disorder prediction 382 425 - -
Ahy7g1918 594 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 464 - -
Ahy7g1918 594 Gene3D Cysteine proteinases 16 344 - -
Ahy7g1918 594 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 17 15 464 - -
Ahy7g1918 594 Pfam Ubiquitin carboxyl-terminal hydrolase 23 339 IPR001394 GO:0004843|GO:0016579
Ahy7g1918 594 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 22 342 IPR028889 -
Ahy7g1918 594 MobiDBLite consensus disorder prediction 355 371 - -
Ahy7g1918 594 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 284 302 IPR018200 GO:0004843|GO:0006511
Ahy7g1918 594 MobiDBLite consensus disorder prediction 452 485 - -
Ahy7g1918 594 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 23 38 IPR018200 GO:0004843|GO:0006511
Ahy7g1918 594 CDD Peptidase_C19E 21 340 - -
Ahy7g1918 594 SUPERFAMILY Cysteine proteinases 18 347 IPR038765 -
Ahy7g1918 594 MobiDBLite consensus disorder prediction 355 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1918 Ahy-Chr7 73280041 73287622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1918 21 487 Miscellaneous Gene Families AT2G24640 31.646 5.82e-60 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1703 18 50323492 50332949 Ahy7g1918 7 73280041 73287622 hybridization