Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1816 ATGGGGGTTAATGAAGATTTGATGATGAAGGATGATTCATATGCATCATCAGTGATGGAGGAAGAGGATGATGTTCCACTTCCAGGGTTTAGATTCCACCCAACAGATGAAGAACTTGTGAGTTTCTATCTAAAGAGGAAGCTTGACAAGAAACCAATCAGCATCGAACTCATCAAACAGATTGATATCTACAAGTATGATCCTTGGGATCTTCCAACGAGTGGAAGTGGAGGAGAGAAGGAAGGTTACTTCTTTTGCAAGAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACCAGTTCCGGCTTCTGGAAAGCAACCGGGATAGACAAGCCGGTGTACTCCCATGGCGGCGAAGGAAGCGACTGCATTGGACTCAAGAAGACGCTTGTCTACTACCGCGGCAGCGCCGGTAAAGGTACCAAGACTGATTGGATGATGCACGAGTTTCGCCTCCCTTCTGCCACCACCGAAAACAAAACAAGCCTACTTGCCAACAACAAGAATAATAATAATATCAACAATGCCGATGTTGCCCAAGAAGCTGAAATCTGGACATTGTGTAGAATATTCAAGCGAAATGTGTCACAAAGGAAGCACACAGCAGACTTGAGATCACATTTAGTAACAGCTAATAGTAACAAGCACAAAACCACTAGAACCCATGTTGTTCAATCCAATAATAACAATATTAATCAACATCAAGAATCTTACATCAACTTTGGTGCAACAATCATTGGCCATCACCATTACCATCATCAAAATGAACAGAAGCCAGTGACTAACTACACAGCATGCAATAACAACACTGATCAAATCCAAAGGAACAATAGCAATCATCATCATCATCATCAGTTGAACTATCACCCTTCTTCAGCGGTGGCTACTACTGTGCCACAGCAACAACAACAACAATATCATCATCATCATCAGCTAATGACGGCTCCAGCTTCTAACATGTGGATTAATCCTTCTGCGATGAACGATTTGTTTGCATTTGATGATAACTGGGATGAGCTTGGATCCGTTCTCAAATTCGCTGTTGATACCCCTAGCTTGTAA 1071 0.4258 MGVNEDLMMKDDSYASSVMEEEDDVPLPGFRFHPTDEELVSFYLKRKLDKKPISIELIKQIDIYKYDPWDLPTSGSGGEKEGYFFCKRGRKYRNSIRPNRVTSSGFWKATGIDKPVYSHGGEGSDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSATTENKTSLLANNKNNNNINNADVAQEAEIWTLCRIFKRNVSQRKHTADLRSHLVTANSNKHKTTRTHVVQSNNNNINQHQESYINFGATIIGHHHYHHQNEQKPVTNYTACNNNTDQIQRNNSNHHHHHQLNYHPSSAVATTVPQQQQQQYHHHHQLMTAPASNMWINPSAMNDLFAFDDNWDELGSVLKFAVDTPSL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1816 356 Gene3D NAC domain 35 201 IPR036093 GO:0003677|GO:0006355
Ahy7g1816 356 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 16 315 - -
Ahy7g1816 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 315 - -
Ahy7g1816 356 Pfam No apical meristem (NAM) protein 28 155 IPR003441 GO:0003677|GO:0006355
Ahy7g1816 356 ProSiteProfiles NAC domain profile. 26 196 IPR003441 GO:0003677|GO:0006355
Ahy7g1816 356 SUPERFAMILY NAC domain 26 196 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1816 Ahy-Chr7 67924474 67926852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1816 7 196 NAC Transcription Factor Family AT5G39820 58.031 1.41e-76 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy7g1816 NAM 1.10E-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1807 18 68815716 68818324 Ahy7g1816 7 67924474 67926852 hybridization