Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1530 ATGCAAGACCCAACAATATTTCAACCCATCAAACCCCAATTTCCTGAACAAGAACAACTTAAATGCCCACGTTGCGACTCAACAAACACCAAATTCTGCTACTACAACAACTACAATCTCTCACAGCCACGCCATTTTTGTAAGAATTGCAGAAGGTATTGGACCAAAGGAGGTGCTCTTAGGAACATCCCAGTTGGTGGTGGAAGCAGGAAGAACACAAAAAAATCATCCACCAACAACAACTCCTCCAAACGCCCTACATCATCATCTGCACCATCATCATCATCAGTATCCCCTTCACCATCCGTTTCCACTCCAGCACAGGCTGCTTCATCCGCTCCTGAATCCGACTCGGCCCAGGCCTACGCCGCCCAGCCTACTGTGGCTGATCAAGGCCCAGGCTTAAGCTTCAGTTCCCTATTGGCAACTAGCCATCTGGGGAGCCTATTGGAGGGTCTGAATTCAAATGGATCAAGTCTTAAAATGGTGCAAATGAATGAATTCGGAGTGAATGTGAATTCGACCGGTTCTGTTGAGCCGCCAGTGAGCTCGAATTCTAGTAGAAATCCAGGGTTGGATGTTCAGAGCAATGGCAATAATGCAGAGAGCTTTCTGAGTATGCATAATGGTGATTCAAGCTGTTGGAATAATGGTAGCAATGGATGGTCTAATCTTGCAATATTTACACCAGGATCAAGCTTTCAGTAG 708 0.4605 MQDPTIFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKKSSTNNNSSKRPTSSSAPSSSSVSPSPSVSTPAQAASSAPESDSAQAYAAQPTVADQGPGLSFSSLLATSHLGSLLEGLNSNGSSLKMVQMNEFGVNVNSTGSVEPPVSSNSSRNPGLDVQSNGNNAESFLSMHNGDSSCWNNGSNGWSNLAIFTPGSSFQ* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1530 235 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Ahy7g1530 235 MobiDBLite consensus disorder prediction 69 126 - -
Ahy7g1530 235 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Ahy7g1530 235 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Ahy7g1530 235 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 2 235 - -
Ahy7g1530 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 235 IPR045174 GO:0003700|GO:0006355
Ahy7g1530 235 MobiDBLite consensus disorder prediction 61 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1530 Ahy-Chr7 52503036 52504927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1530 11 150 C2C2-Dof Transcription Factor Family AT1G51700 55.634 3.10e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy7g1530 zf-Dof 2.20E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1530 - - adu:107458974 384.8