Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2871 ATGAATATATTGGCAGGTAATGTTGCATCAGCCACATTATTCACCCTACGAAACAATTGCAAATACACTGTTTGGCCCGGAAGTCTTTCCGGCAATGGCCCAAATATTCTTGACACCGATCTGTCTCTAAGACCCGGTTCTTCGGCCCAATCAAATGTTTCGGCTGGTTGGTCAGGACGTTTTTGGGCTAGAACCGAGTGCAATTTTGATAGGACCGGTAACGGCAAATGTGCTACCGGAGACTGTCTCGGTGGCCTCAAGTGTATTGGCGGAGGTGCTCCACCGGTAACACTGGCCGAGTTCACGGTTGGAAGTGCCGACAATGGCAATATAGACTTTTATGATGTGAGCTTGGTAGACGGTTACAATGTTCCTATGGGGGTACATGCAACCGGAGGAATCGGTAACTGTCAATATGCTGGCTGCGTTTCTGACCTAAATGATAACTGTCCAAAGGAGTTACAGGTAAAAGATGTTACCGGTTTGGTAGTTGCATGCAAGAGTGCGTGTGCGGCATTCAACAGTCCGGAATATTGTTGCACCGGAGAGCACGGAACACCACAGACATGCCCACCTACAAATTACTCAAAAATGTTTAAGATTGCATGTCCAAGAGCTTATAGTTATGCTTATGATGATGCTTCAAGCACTTGTACATGTTCTGGAGCAAATTACACCATCACTTTTTGTCCCACAGAATCCTCATAA 708 0.4605 MNILAGNVASATLFTLRNNCKYTVWPGSLSGNGPNILDTDLSLRPGSSAQSNVSAGWSGRFWARTECNFDRTGNGKCATGDCLGGLKCIGGGAPPVTLAEFTVGSADNGNIDFYDVSLVDGYNVPMGVHATGGIGNCQYAGCVSDLNDNCPKELQVKDVTGLVVACKSACAAFNSPEYCCTGEHGTPQTCPPTNYSKMFKIACPRAYSYAYDDASSTCTCSGANYTITFCPTESS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2871 235 PRINTS Pathogenesis-related protein signature 60 71 IPR001938 -
Ahy6g2871 235 PRINTS Pathogenesis-related protein signature 73 102 IPR001938 -
Ahy6g2871 235 PRINTS Pathogenesis-related protein signature 13 25 IPR001938 -
Ahy6g2871 235 PRINTS Pathogenesis-related protein signature 221 230 IPR001938 -
Ahy6g2871 235 ProSitePatterns Thaumatin family signature. 73 88 IPR017949 -
Ahy6g2871 235 PANTHER OS03G0233200 PROTEIN 7 232 IPR001938 -
Ahy6g2871 235 Gene3D Thaumatin 12 231 IPR037176 -
Ahy6g2871 235 ProSiteProfiles Thaumatin family profile. 11 231 IPR001938 -
Ahy6g2871 235 CDD TLP-PA 14 230 - -
Ahy6g2871 235 SUPERFAMILY Osmotin, thaumatin-like protein 13 231 IPR037176 -
Ahy6g2871 235 PIRSF PR5 1 235 IPR001938 -
Ahy6g2871 235 SMART tha2 14 231 IPR001938 -
Ahy6g2871 235 Pfam Thaumatin family 18 231 IPR001938 -
Ahy6g2871 235 PANTHER PATHOGENESIS-RELATED PROTEIN 5-RELATED 7 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2871 Ahy-Chr6 114773221 114775123 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3625 16 154077226 154079128 Ahy6g2871 6 114773221 114775123 hybridization