Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2854 ATGGCATTCTTAATCTTCAAATCTCAACCTCCTTACAACACCATCACCACAATCTCCAACCTCATTTCTTCAAACCCAATAGACCTTGCAAGAATCAATGATGTCACTACTTCACACACAATGTTCCAAATTGGTAAAGAGGTTATTGTCCCTTTGAAATGCTCTTGTTCTTCAATGAAGGACACCAAGTATTACTATTACCAATCCAAAACCAAACATGTCTTGGGTGCAATCTTGCCAGAAACTTTCCAAGGCTTAACCACTTGTGATTCCCTAAAGAGGTTCAATCCTTATCCGGAGCGCGATTTGCGCCCCGGCATGGAGTTGAATGTTCCATTAAGGTGTGCTTGTCCAACATGGAATCAAGAAAGAAATGGCACCAAGTATTTGATGACTTATTCTGTGAATTGGGGTGACACCATTTCTAGCATTGCATCAAGATTCAATGCAACAATACAGAATCTTCTTGAAGCCAATGGTATTTCCATGGAAACTACAATTTTTCCATTCACAACTCTTCTGATTCCTTTGCCAAGTGAACCACTGAGTTCATCAACAATCACAGTTGCCAATGATCCACCATATGATTCTACTTCACTGCATGCCAAAACCGGTTCCAAAGGGATCGAGTTAAAGAAACTAGTAATATTCAATATAATTCTTGCTGCTATATTGATTCTGAGCATCATGTCATCTCTAGTGTTTTTTATAGGAAATATATCAGAAAGATTCATCAAGGCAGGCGAAATCCGTAACAAAAATCATGCGATTTCAGAAGATATCCCCGTCGAAATAGCGAGCATTGATGTGAACTATTCTAAATTGTATAAATTCGAGGAAATCAAGGATGCCACCGAAAATTTCAGTTCAAGGAACAGAATCAAAGGTTCTGTATTTCACGGCGAATTCGGTAACAAAAGGGAAAGTTTTGCTGTCAAAAGAAGAATAAGTAAAGGGTATGCTTCAAAAGAAATAAATTTACTTAGAAGAATCAACCATTTCAACTTGATCAAGCTTCAAGGATATTGTGAAAATGAAGATTTGTTCTATCTTGTGTTTAAATTCATGGAAAATGGTTCCTTAAGAGAATGGCTTAGTAGTGAAGAAAACTCTTTTTTGCATAAAAGTTGGTCAAAGAGGATTCAAATTGCTTTGGATATTGCAAATGGACTTCAATATCTTCACAACTTCACATATCCTTGTTATGTTCACAATGATATTAACAGTGGAAACATTCTTCTAAACAAAGATCTAAGGGCAAAGATAGCAAATTTTTCTCTAGCAGAAGAATTATTAGAAAGGAGAATGATAACAAGTTCAAGTTCTTGTCACACTTCAGATGATGTTTATGCCTTTGGAGTGGTACTTTTGGAATTGATCACTAGCAAAGAATGTGTTACACTGCATGGTTTATCAAGAGAAGGAATAACAATGGTTTCTAGGATCATGATGAATAATCTCATTAGTAAGGAGCATGAAGAAGAGAAGTTGAGTTTGTTCTTTGATCCAAGGCTCATTGGAAACATTGAGAGAAAAAGTGCTTTGATGCTAGTTAAGCCAAGTTTAGCTTGCTTGAATCAAGAATCAGAAAGTAGACCAAACATGTCAGAGGTGGTCTCTACCTTGTGGAAAACACTTTCTGAGTCCCATAATAATTGTTGGAGTGAGAAAATTGTCATGTTGAAATGTTAA 1692 0.3635 MAFLIFKSQPPYNTITTISNLISSNPIDLARINDVTTSHTMFQIGKEVIVPLKCSCSSMKDTKYYYYQSKTKHVLGAILPETFQGLTTCDSLKRFNPYPERDLRPGMELNVPLRCACPTWNQERNGTKYLMTYSVNWGDTISSIASRFNATIQNLLEANGISMETTIFPFTTLLIPLPSEPLSSSTITVANDPPYDSTSLHAKTGSKGIELKKLVIFNIILAAILILSIMSSLVFFIGNISERFIKAGEIRNKNHAISEDIPVEIASIDVNYSKLYKFEEIKDATENFSSRNRIKGSVFHGEFGNKRESFAVKRRISKGYASKEINLLRRINHFNLIKLQGYCENEDLFYLVFKFMENGSLREWLSSEENSFLHKSWSKRIQIALDIANGLQYLHNFTYPCYVHNDINSGNILLNKDLRAKIANFSLAEELLERRMITSSSSCHTSDDVYAFGVVLLELITSKECVTLHGLSREGITMVSRIMMNNLISKEHEEEKLSLFFDPRLIGNIERKSALMLVKPSLACLNQESESRPNMSEVVSTLWKTLSESHNNCWSEKIVMLKC* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2854 563 SMART LysM_2 132 176 IPR018392 -
Ahy6g2854 563 ProSiteProfiles LysM domain profile. 131 175 IPR018392 -
Ahy6g2854 563 SUPERFAMILY LysM domain 131 177 IPR036779 -
Ahy6g2854 563 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 548 - -
Ahy6g2854 563 Pfam LysM domain 133 176 IPR018392 -
Ahy6g2854 563 Gene3D LysM domain 130 188 IPR036779 -
Ahy6g2854 563 Gene3D Phosphorylase Kinase; domain 1 262 355 - -
Ahy6g2854 563 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 1 548 - -
Ahy6g2854 563 Pfam Protein tyrosine and serine/threonine kinase 321 541 IPR001245 GO:0004672|GO:0006468
Ahy6g2854 563 ProSiteProfiles Protein kinase domain profile. 288 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2854 563 SUPERFAMILY Protein kinase-like (PK-like) 278 552 IPR011009 -
Ahy6g2854 563 CDD LysM 132 175 IPR018392 -
Ahy6g2854 563 Gene3D Transferase(Phosphotransferase) domain 1 356 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2854 Ahy-Chr6 114460696 114462637 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy6g2854 PK_Tyr_Ser-Thr 1.50E-23 CL0016