Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2840 ATGTTGACAAATTCTCTTCCATCAATAATGCAAACCTTGTTAGCATCATCACCCCCTAAATTTCAAGGACCAGATTTGTCCTTAAACATAAGCCCTCCATGTGTTAGTGTCTCAGATTCCGAAAACAACAACCTCAACAACAACAACAACATGAACATGAACATGAACATGAACATGTTCCTAAGTAGTAGGAAGAAAATTGTTTACAATGATATAAGTACTAGTTCAACTACTTCAGATTCAGGTGGTAGTAGTTGTGGAAGTGCAAGTGACTTAAGCCATGAAAACAACAACCTTCTTCATCATCAACCTACATTGACCTTAGATTTGAATAATTACCATCATCATCATCAAGGACTTTCTAGAAGCTTCAATAATCACCACCATTTCCAACCTCAAATCTATGGCCGCGAGTTCAAGAGAAGCTCCAGGGTCATTAATGGAGTCAAGAGGAGCGTGAGAGCACCTAGGATGAGATGGACAACAACCCTCCATGCCCATTTTGTTCATGCTGTTCAACTCCTTGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAAAGTCACTTACAGATGTATAGAACAGTGAAGAGCACTGACAAAAGCACAGGTCATGGCCAGACAGATATGGGTTTAATCCCAATGCCAAGGATTAATAATGTTGCTCATTTGCATGCCAATAATGGAGTTTCAGCTTCTCATGATGATAGACCAAATAATTTACCACATCCACCACAAAATTATTCCCAAAGGTCATGGCAATCATCAATAATGGAGGCAAATACAAACAATAGTAGACAAAAACCCCAACTTGGTTTGACGGATTCTCATACAAAGGGATATGAAACCATGGTGGAAGAGCACAATTGTGGGGGCATGTCTAATTGCATGAAGGAGAATAAGTTGGATTCTACTTCATTGTCAAGTTCTGATGAGTTGATGCTTGATCTTGAATTCACCCTTGGAAGGCCAAATTGGGAAAAGGAACATCAAAAGGAGTCATCAAGAGTAGAATTAACCCTTCTCAAATGTTAA 1077 0.3937 MLTNSLPSIMQTLLASSPPKFQGPDLSLNISPPCVSVSDSENNNLNNNNNMNMNMNMNMFLSSRKKIVYNDISTSSTTSDSGGSSCGSASDLSHENNNLLHHQPTLTLDLNNYHHHHQGLSRSFNNHHHFQPQIYGREFKRSSRVINGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKSTGHGQTDMGLIPMPRINNVAHLHANNGVSASHDDRPNNLPHPPQNYSQRSWQSSIMEANTNNSRQKPQLGLTDSHTKGYETMVEEHNCGGMSNCMKENKLDSTSLSSSDELMLDLEFTLGRPNWEKEHQKESSRVELTLLKC* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2840 358 SUPERFAMILY Homeodomain-like 153 210 IPR009057 -
Ahy6g2840 358 MobiDBLite consensus disorder prediction 242 265 - -
Ahy6g2840 358 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 156 209 IPR006447 GO:0003677
Ahy6g2840 358 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 350 - -
Ahy6g2840 358 MobiDBLite consensus disorder prediction 74 96 - -
Ahy6g2840 358 Gene3D - 155 212 - -
Ahy6g2840 358 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 350 IPR044847 GO:0000976|GO:0006355|GO:0010158
Ahy6g2840 358 Pfam Myb-like DNA-binding domain 157 208 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2840 Ahy-Chr6 114243241 114249780 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy6g2840 Myb_DNA-binding 1.60E-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3594 16 153547246 153553785 Ahy6g2840 6 114243241 114249780 hybridization
Ahy6g2840 6 114243241 114249780 Ahy17g2468 17 118095914 118099920 PCT
Ahy6g2840 6 114243241 114249780 Ahy8g0269 8 5591211 5595134 PCT
Ahy17g2468 17 118095914 118099920 Ahy6g2840 6 114243241 114249780 PCT
Ahy8g0269 8 5591211 5595134 Ahy6g2840 6 114243241 114249780 PCT