Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2837 ATGGCCTGCGAGAGCTGTGGCTGTGAAGGGAACTTGAATGTGAGAAAGCCTCAGTTCTATGAGTTTTATTCTTCCACTCCTGAGAAGCTGAAAATTCCTGCTGCATTCATTCATCACTTGCAGGGTAGGGCTGATGGCTTAGTTTCAGTAACAGGCCCTAGTGGAAAATCTTGGCCAGTTCAATTGATTAAGATGGAAAATGATATGTTCTTCCATCAGGGATGGCCATCGTTTGTGGGAGATCACCGTCTGGAATGCGGTGATCTGTTGGTTTTCAGATATGAAGGTTACCTAAATTTCACCGTGCAAGTATTTGATAAGAATAAATGTGAAAAACTGGGATTTAATTCTGAATGCAGTCAAAATTCAGGCAACTTTGATAATATAAGAGGTCACAAAAGAGATAGGAATGAGAAATCCTCTCTGGATGTTATTGTTGAAGGGGCTACAAAGAAAATGAGAGGCAACAATGCCGACAACCAGGAACTTAAGCTGAGTATAGTTGGGAAAGACATATTGCAATATGAGTTAGTAAAACCTATTAGTATGTTCAAAGAAAAAGAAGAAACTTCCAGAGCATGTTCAACTAATGACATTCCGTTGCCTTTTCATGTGGGAAATAGCAATGAAGATGAAGATGCTGATCAATATATTCTGAATGGTATTTCACTATCAAACTTAGCAGCACATGATGAGAAAAAAGTAGCTCGATCATTTACTTCATCTTTTCCATATTTTGTAAGGATCATGAAAAGCTTCAACGTTAGCGGTTCATATACTCTGAATATCCCGTATCAATTTTCAATGGCACATCTCCCAAACTGCAAGATAAAGATTATCCTCCATAATTTGAAAGGAGAACATTGGACTGTTAATTCTGTGCCATCAACAAGAGTGCATACAAGTCACACTCTCTGCGGAGGATGGATGGCCTTTGTGCGTGGCAATAACATAAAGGTTGGAGATGTCTGCATTTTTGAACTCGTGCATGAGTGTGAATTACTTGTTCGTATTGCTGGAGGTGGAAAAGATCTACAAGACCCGGTTGCGAAACCAGATTTAAGTAACCCTAGTGCAGGACATGCTATCACTTGCCATAAGGCTTCAAGATATATGTCGGTGAATCCTAAAGACAACCCAAAAAACATAATAAACGTTGATCAATCAGTTAAAAAGCGGTCAAAGGTTGGTCAAGAAGCTGCTTTTTCCATTGAATTAAGGAAATCTGGTAAAAGATCAAATTCTTCTAAGAAAACGGGGCTTGGCAATCGGACGAAAGCTGCCAATAAAAAGTTGGCAGAGACAGCTGCTCAGAAGAGGCATCGTGTTGAAGATGAATTAAGCTCACAAGCTAATGCTGGTTTGAGAATGTTGTTTGCACTCGATGAACAAAGAGTGGCTCAAGCCTTTACTTCCCCTTTTCCTAATTTTGTGAAAATCATGAAAAAGTTCAATGTCAGTGGATCATACACTTTGAAAATCCCATACCAGTTCTCTGCTGCACATCTCCCAGCCTACAAAACAGAAATTATTCTTCGAAATTTAAGAGGTGAAAGTTGGACTGTGAACTCTGTACCGGACGCAAAAGGCAGAACGGTGCATACCTTTTGTGGTGGATGGATGGCCTTTGTTCGCGATAATGACATCAATTTTGGAGACACATGCATATTCGAACTTGTTGCTCAGGGTGAGATGCGGGTTTATATATCTGGGGTGGGAAAGGAGGGGCTTGAACATCAAAATGGTCAAGTGAAACTTAATAGATTATTGGCCAACGTTCCATCTACCTGCTAA 1794 0.4008 MACESCGCEGNLNVRKPQFYEFYSSTPEKLKIPAAFIHHLQGRADGLVSVTGPSGKSWPVQLIKMENDMFFHQGWPSFVGDHRLECGDLLVFRYEGYLNFTVQVFDKNKCEKLGFNSECSQNSGNFDNIRGHKRDRNEKSSLDVIVEGATKKMRGNNADNQELKLSIVGKDILQYELVKPISMFKEKEETSRACSTNDIPLPFHVGNSNEDEDADQYILNGISLSNLAAHDEKKVARSFTSSFPYFVRIMKSFNVSGSYTLNIPYQFSMAHLPNCKIKIILHNLKGEHWTVNSVPSTRVHTSHTLCGGWMAFVRGNNIKVGDVCIFELVHECELLVRIAGGGKDLQDPVAKPDLSNPSAGHAITCHKASRYMSVNPKDNPKNIINVDQSVKKRSKVGQEAAFSIELRKSGKRSNSSKKTGLGNRTKAANKKLAETAAQKRHRVEDELSSQANAGLRMLFALDEQRVAQAFTSPFPNFVKIMKKFNVSGSYTLKIPYQFSAAHLPAYKTEIILRNLRGESWTVNSVPDAKGRTVHTFCGGWMAFVRDNDINFGDTCIFELVAQGEMRVYISGVGKEGLEHQNGQVKLNRLLANVPSTC* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2837 597 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 6 451 - -
Ahy6g2837 597 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 454 595 - -
Ahy6g2837 597 SUPERFAMILY DNA-binding pseudobarrel domain 470 571 IPR015300 -
Ahy6g2837 597 CDD B3_DNA 29 106 IPR003340 GO:0003677
Ahy6g2837 597 ProSiteProfiles B3 DNA-binding domain profile. 246 342 IPR003340 GO:0003677
Ahy6g2837 597 Gene3D - 11 110 IPR015300 -
Ahy6g2837 597 CDD B3_DNA 475 569 IPR003340 GO:0003677
Ahy6g2837 597 Pfam B3 DNA binding domain 246 337 IPR003340 GO:0003677
Ahy6g2837 597 Pfam B3 DNA binding domain 477 569 IPR003340 GO:0003677
Ahy6g2837 597 Pfam B3 DNA binding domain 27 108 IPR003340 GO:0003677
Ahy6g2837 597 MobiDBLite consensus disorder prediction 407 430 - -
Ahy6g2837 597 CDD B3_DNA 244 338 IPR003340 GO:0003677
Ahy6g2837 597 ProSiteProfiles B3 DNA-binding domain profile. 477 573 IPR003340 GO:0003677
Ahy6g2837 597 ProSiteProfiles B3 DNA-binding domain profile. 15 108 IPR003340 GO:0003677
Ahy6g2837 597 Gene3D - 462 572 IPR015300 -
Ahy6g2837 597 Gene3D - 228 340 IPR015300 -
Ahy6g2837 597 SUPERFAMILY DNA-binding pseudobarrel domain 28 110 IPR015300 -
Ahy6g2837 597 SMART B3_2 477 573 IPR003340 GO:0003677
Ahy6g2837 597 SMART B3_2 246 342 IPR003340 GO:0003677
Ahy6g2837 597 SMART B3_2 22 108 IPR003340 GO:0003677
Ahy6g2837 597 PANTHER B3 DOMAIN-CONTAINING 6 451 - -
Ahy6g2837 597 PANTHER B3 DOMAIN-CONTAINING 454 595 - -
Ahy6g2837 597 SUPERFAMILY DNA-binding pseudobarrel domain 239 339 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2837 Ahy-Chr6 114198757 114202569 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy6g2837 B3 2.30E-14 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3591 16 153502762 153506574 Ahy6g2837 6 114198757 114202569 hybridization