Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2738 ATGGCACATCATCATCATCATCAACACCACACAGATTCTTTGTACTGCTCAGAACAACATTATTTTGATGATGAGGAACATGATCATGTGTTTCTAGAACAAGACATGTTTTGTGATGATTCAGAGTTGAAAACTCTTGTTTCAAAAGAACAAGAACAAGAGAAGAAACTCAGCATCATTCTTTGCATTGATGAGTGGGAAAGAAGAGAAGCAGTTGAATGGATTCTTAGAGTGAATGCATATTTCTCATTCTCTGCTCTCACAGCTTCTCTTGCTGTTAACTACCTTCACAGATTCCTCTTCACCTTCACCATGAAGAAGCAGCAGCCATGGTTGACTCATCTTGCTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACCCAAGTTCCTCTTCCTCTTGATTTACAAGTGGAGGACAGCAAATATGTGTTTGAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATTACATCACAAGAAGACTTAAATGTTTTCACTTCCTCAACACATGTCAGTCTCTTCTTCTTTCTCTCTTACCAGATTCCAGGCTTATTGGCTATCTTCCTTCTGTGTTGGCAACTGCTACAATGATGCATGTAGTTAACAACAATGTGGAGCCTTATCTTGCATCTGAATACCAAAATCAGTTCTTGGGTATTCTTGAAATCAACAAGGAGAAGTTAGAAGAATGCTACAATCTCATATTGGAGGTTGTATCAGAGTCAGGATTCAACTACAAAGAATCCAAAAAACGCAATTTTGGATCAATTATTATTCCTAGTAGCCCAAGTGGTGTAATTGATGTGTCATTTAGCTTTGATCATCATGATAGCTCTAATGATTCATGGGAAGTAGTATCTGCTAATGATTCTGTTTCATCAACACCAAACAGCATCAACAAGAAGAGGCCTAGGACTCAAGAACACACTGCTTCCTTTGAACAATTCAAGCAATGA 1020 0.3833 MAHHHHHQHHTDSLYCSEQHYFDDEEHDHVFLEQDMFCDDSELKTLVSKEQEQEKKLSIILCIDEWERREAVEWILRVNAYFSFSALTASLAVNYLHRFLFTFTMKKQQPWLTHLAAVACISLAAKMEETQVPLPLDLQVEDSKYVFEAKTIKKMEILVLSTLEWKMNPPTPLSFIDYITRRLKCFHFLNTCQSLLLSLLPDSRLIGYLPSVLATATMMHVVNNNVEPYLASEYQNQFLGILEINKEKLEECYNLILEVVSESGFNYKESKKRNFGSIIIPSSPSGVIDVSFSFDHHDSSNDSWEVVSANDSVSSTPNSINKKRPRTQEHTASFEQFKQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2738 339 CDD CYCLIN 68 160 IPR013763 -
Ahy6g2738 339 SMART cyclin_7 73 161 IPR013763 -
Ahy6g2738 339 SUPERFAMILY Cyclin-like 152 261 IPR036915 -
Ahy6g2738 339 Pfam Cyclin, N-terminal domain 47 168 IPR006671 -
Ahy6g2738 339 SUPERFAMILY Cyclin-like 40 168 IPR036915 -
Ahy6g2738 339 SMART Cyclin_C_2 170 283 IPR004367 -
Ahy6g2738 339 MobiDBLite consensus disorder prediction 305 322 - -
Ahy6g2738 339 Gene3D - 43 254 - -
Ahy6g2738 339 PANTHER CYCLINS 29 323 IPR039361 -
Ahy6g2738 339 Gene3D - 56 168 - -
Ahy6g2738 339 PANTHER CYCLIN D3.1 PROTEIN 29 323 - -
Ahy6g2738 339 Pfam Cyclin, C-terminal domain 170 268 IPR004367 -
Ahy6g2738 339 MobiDBLite consensus disorder prediction 305 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2738 Ahy-Chr6 113022980 113025552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2738 12 274 Core Cell Cycle Gene Families AT4G34160 48.084 6.63e-86 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3491 16 152326985 152329557 Ahy6g2738 6 113022980 113025552 hybridization
Ahy6g2738 6 113022980 113025552 Ahy17g3258 17 134724152 134725527 PCT
Ahy6g2738 6 113022980 113025552 Ahy8g0977 8 18826146 18827786 PCT
Ahy17g3258 17 134724152 134725527 Ahy6g2738 6 113022980 113025552 PCT
Ahy8g0977 8 18826146 18827786 Ahy6g2738 6 113022980 113025552 PCT