Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1339 ATGGAGAAAATGACAGGAGCAGGAGGCGGAGGAGGGGCAACAGTAGTGTTGTCGGCGAAGGAGGCGTTCGAGAAACTGGAGAAGGTTGGAGAAGGGACGTACGGGAAGGTGTACAGAGCGAGGGACAAGGCCACCGGCAAGATCGTGGCCCTCAAGAAGACTCGTCTCCACGAGGACGAAGAGGGCGTCCCTCCCACCACTCTCCGCGAGGTCTCCATCCTACGCATGCTCTCCCGCGATCCCCATGTTGTCAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGCAAGACCGTGCTCTACCTGGTATTCGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAGACTGGTCAATTCATCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTCTGTAAGGGCGTTGCTTTCTGCCACGGACATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAACAACAATGATGCTCAAAATAGCTGATCTTGGACTCGCTCGTGCTTTTACTGTGCCAATTAAGAAATACACCCACGAGATACTAACCTTGTGGTATAGAGCTCCCGAAGTCCTTCTGGGTGCTACCCATTACTCAATGGCGGTGGATATGTGGTCCGTTGGCTGCATATTTGCTGAACTTGTCGCTAAGCAAGCCCTTTTCCCTGGTGATTCGGAACTGCAACAACTCCTCCACATATTCAGGCTATTGGGTACCCCTAATGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAACTGGCATGAGTACCCTCAGTGGACCCCTCAAGAGCTGTACATGGCTGTTCCAACCTTGGATGATCAAGGAGTCGATCTACTATCTCAAATGCTGCAATACGAGCCTTCCAAGCGGATTTCTGCAAAGAAAGCTATGGAACACCCTTACTTCCAGGACCTGGATAAGACCAATCTCTAG 966 0.5062 MEKMTGAGGGGGATVVLSAKEAFEKLEKVGEGTYGKVYRARDKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQFIPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRTTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVAKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWTPQELYMAVPTLDDQGVDLLSQMLQYEPSKRISAKKAMEHPYFQDLDKTNL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1339 321 PANTHER CELL DIVISION PROTEIN KINASE 17 320 - -
Ahy6g1339 321 Gene3D Phosphorylase Kinase; domain 1 18 109 - -
Ahy6g1339 321 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Ahy6g1339 321 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Ahy6g1339 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Ahy6g1339 321 SMART serkin_6 23 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1339 321 PANTHER - 17 320 - -
Ahy6g1339 321 ProSiteProfiles Protein kinase domain profile. 23 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1339 321 Gene3D Transferase(Phosphotransferase) domain 1 111 320 - -
Ahy6g1339 321 Pfam Protein kinase domain 23 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1339 Ahy-Chr6 20451369 20453346 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Ahy6g1339 Pkinase 8.00E-72 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0005 16 50460 52358 Ahy6g1339 6 20451369 20453346 hybridization