Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1268 ATGGGAGTTCCGGCGTTTTACCGGTGGCTGGCGGAGAAGTATCCGATGGTGGTTGTCGATGCCGTCGAGGAGGAACCGGTGGTGATCGACGGAATCGCGATTCCAGTGGATACGAGCAAGAAGAACCCTAACAACCTTGAATACGATAATCTGTACCTCGATATGAACGGCATCATTCACCCTTGTTTTCACCCCGAGGATAGGCCATCTCCGACTTCATTTGATGAGGTGTTCCAGTGCATGTTTGACTACATTGATAGGCTGTTTGTGATTGTCCGGCCTAGGAAGCTGCTCTACATGGCTATTGATGGTGTGGCACCGAGGGCTAAAATGAATCAGCAACGGTCTAGGCGGTTCAGAGCAGCAAAAGATGCAGCTGACGCAGCTGCTGAAGAAATTAGGTTAAGAGAGGAATTTGAGAGGGAGGGCAGAAAGCTTCCTCCCAAAGAAGAGTCCCAGACTTTCGATTCAAATGTCATTACACCTGGAACTGAATTTATGGCTGTTTTATCAATTGCGCTCCAGTATTATGTTCATCTTAGGTTAAACAATGACCCTGGTTGGCAGAATATAAAGGTTATTCTTTCAGATGCAAATGTTCCTGGTGAGGGGGAGCATAAGATTATGTCCTATATACGGTTACAGAGGAATCTTGAAGGTTATGATCCAAATACAAGACATTGCCTGTATGGTTTGGATGCTGATTTGATTATGTTGGCTTTAGCTACCCATGAAGTGCACTTTTCAATTCTAAGAGAGGTTGTATTTACTCCCGGTCAAGACAAATGTTTCCTCTGTGGTCAGATGGGTCACATGGCTGCTGACTGTGAAGGAAAGGCAAAAAGAAAGGCCGGAGAATTTGATGAAAAAGGAGATCCTATTGTGGTTAAAAAGCCTTACCAGTTTCTAAACATTTGGACATTGAGGGAATATCTGGAGTATGAGATGAGAATTCCGAATCCTTCATTTGAGATTGATTTTGAGCGAATTGTTGATGACTTTATCTTCATGTGCTTTTTTGTTGGCAATGATTTCCTTCCCCATATGCCTACACTAGAAATTAGAGAGGGTGCAATTAACTTGCTTCTAGCAGTATACAAGAAGGAGTTCAATGCACTAGGTGGTTATTTAACCAAAGGAAGTAAGCCAAATTTGGATAGAGTGGAGCACTTTATTCAGGCTGTTGGAGCTTATGAAGATAGAATTTTCCAGAAAAGAGCTCGATTGCATCAGCGACAAGCAGAAAGAATTAAGCGGGATAAGGCTCATTCAAGGAGGGGAGATGATGCCCAGCCTCAATTTCAACCAGAGTCTCTAGTTGCAGTTTCACGATTTCATGGTTCTCGTCTTGCTTCAGCTCCAACGCCTTCACCATTTCAACAATCTGGGCACCATGATCCCAGCTCATCTGGGAAAGACCATAGGAGTGCATCTGAGGCGCTCCCAAAAGTTGCTAAGCTATCTTCTGGGGCAACTGTTGCTGCTGCTATTGTTGAAGCTGAGAATAGTCTTGAAATAGATTTTCAAGATAACAAAGACGAATTGAAAGCAAAACTAAAGGAGGTACTTCGTGAGAAATCTGATGTATTCAATTCACAAAATGCCGGAGAGGATAAGATCAAATTGGGAGAACCAGGCTGGAAAGAGAGATATTATGATGAGAAGTTCTCAGCTAAAACTCCCGAGGAACTTGAAATGATACGGAAAGATGTTGTTTTGAAATACACTGAAGGCTTGTGTTGGGTGATGCACTATTATTACGAAGGTGTTTGTTCTTGGCAATGGTTTTATCCTTATCATTATGCCCCATTTGCATCTGATCTCAAGGACCTTGGGAGTCTTGATATTAACTTTACACTGGGTACCCCATTCAAACCTTTTGACCAACTTCTTGGGGTTTTCCCTGCTGCGAGCTCACATGCCCTTCCTCAACCATATAGGAAACTTATGACAGAAGCTGACTCACCAATCATTGATTTTTATCCAGTTGACTTTGAAGTGGACATGAATGGCAAACGCTATTCTTGGCAGGGTATTGCAAAGTTGCCTTTTATTGATGAAGCACGTCTTCTTGCAGAAGTTAAAAAAGTTGAAAAATTGTTAACACCAGAGGAGATGAGGCGAAATGCTATCATGTTTGACTTGCTTTTCGTAAATTCCTGTCATCCACTTTCTGCATGCATAAGTACACTTGACAACAAATGCAGAAACATGTCCGACAGTGAGCGTGTTGATGTCAAAGAACAAATCAATCCCAAAGAAAGGTATACGTGCAGTGGTGGAATGAATGGTTTTATATCCTTATGTGGTGGAGAGCCTTGCCCTCCTATCTTTAGGTCTCCTGTTGAAGGCATGGAAGATATTATGGACAATCATGTCATATGTGCCATATACAGACTCCCACAGGCGCATAAACACATTACTCGGCCACCACCAGGAGTTAAATTTCCAAAGAAGACTGTGACTCTTGGGGATATGAAACCTGAACCAGTATTATGGCATGAAGATTCTGGTGGGAGACGGGGTGGTGGGGATAATGGGAGGAGAAACCCTCCAGGATCTATTTCTGGTCGAGAGCTTGGAGATGCAGCACACAGATTAGTAGCGAATTCCTTACAAGCAAAAGGTGCCAACAATGGATATCGCTATCCGATTAATGGACCACCTCCATCTTACGCACCACCAATGGCTCACCAAAGATTGCCTCCCTACAATTATGAATCACACCCAGGATACGGTGCCATGCCACCTTCTGTGATGCCTCCACTCCAGGGCCAGCAGCCTTATCGACCTTATGCTACTGTCCCTACCCAACAGTATGGTTATAATCAGCCATATCAGCTGCCTCCCCCGGCAATGTACAATCATCATCATCAACCACCTGGTTCTTATGAAAGAAATAACCACCAACACCCCCCACGATCAAACCATTATGGAAGAAATCATGGTAGTGGGGGAAGTGGGAGGGATGGATACCAACCATCAGGTAATAATCACAATGCCAGGTATCCAAATGCGTCGCAAGGGGCATTTGGTAGTCATCATCAAGATGTTCGACATCATGGCCAAGGTTACCAACCATCTAGACATCACCAGAATTGGGCTCCAAGGAATGACGAAAATGGCCCCAGGGATTATGGGCACCAGCATTCGGCCAATCAATTTTCTTCTTTGGACAGAAGGGGAAACAGGAAGCCAATGCCACCACCTGGTTATAGTCGCAGATAA 3228 0.4396 MGVPAFYRWLAEKYPMVVVDAVEEEPVVIDGIAIPVDTSKKNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFQCMFDYIDRLFVIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEIRLREEFEREGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLEGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQDKCFLCGQMGHMAADCEGKAKRKAGEFDEKGDPIVVKKPYQFLNIWTLREYLEYEMRIPNPSFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLLAVYKKEFNALGGYLTKGSKPNLDRVEHFIQAVGAYEDRIFQKRARLHQRQAERIKRDKAHSRRGDDAQPQFQPESLVAVSRFHGSRLASAPTPSPFQQSGHHDPSSSGKDHRSASEALPKVAKLSSGATVAAAIVEAENSLEIDFQDNKDELKAKLKEVLREKSDVFNSQNAGEDKIKLGEPGWKERYYDEKFSAKTPEELEMIRKDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGSLDINFTLGTPFKPFDQLLGVFPAASSHALPQPYRKLMTEADSPIIDFYPVDFEVDMNGKRYSWQGIAKLPFIDEARLLAEVKKVEKLLTPEEMRRNAIMFDLLFVNSCHPLSACISTLDNKCRNMSDSERVDVKEQINPKERYTCSGGMNGFISLCGGEPCPPIFRSPVEGMEDIMDNHVICAIYRLPQAHKHITRPPPGVKFPKKTVTLGDMKPEPVLWHEDSGGRRGGGDNGRRNPPGSISGRELGDAAHRLVANSLQAKGANNGYRYPINGPPPSYAPPMAHQRLPPYNYESHPGYGAMPPSVMPPLQGQQPYRPYATVPTQQYGYNQPYQLPPPAMYNHHHQPPGSYERNNHQHPPRSNHYGRNHGSGGSGRDGYQPSGNNHNARYPNASQGAFGSHHQDVRHHGQGYQPSRHHQNWAPRNDENGPRDYGHQHSANQFSSLDRRGNRKPMPPPGYSRR* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 829 843 - -
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 825 859 - -
Ahy6g1268 1075 Coils Coil 122 142 - -
Ahy6g1268 1075 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Ahy6g1268 1075 Pfam Xrn1 helical domain 325 826 IPR041412 -
Ahy6g1268 1075 CDD PIN_XRN1-2-like 51 312 - -
Ahy6g1268 1075 Pfam Zinc knuckle 262 276 IPR001878 GO:0003676|GO:0008270
Ahy6g1268 1075 Pfam XRN 5'-3' exonuclease N-terminus 1 253 IPR004859 GO:0003676|GO:0004527
Ahy6g1268 1075 SUPERFAMILY Retrovirus zinc finger-like domains 258 283 IPR036875 GO:0003676|GO:0008270
Ahy6g1268 1075 Coils Coil 505 525 - -
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 988 1012 - -
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 413 437 - -
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 940 1075 - -
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 449 483 - -
Ahy6g1268 1075 Gene3D - 148 387 - -
Ahy6g1268 1075 Gene3D - 1 143 - -
Ahy6g1268 1075 PANTHER 5'-3' EXORIBONUCLEASE 1 1034 - -
Ahy6g1268 1075 PANTHER 5'->3' EXORIBONUCLEASE 1 1034 IPR027073 -
Ahy6g1268 1075 Gene3D - 600 711 - -
Ahy6g1268 1075 PIRSF Exonuclease_Xrn2 1 1042 IPR017151 GO:0004534|GO:0005634|GO:0006139
Ahy6g1268 1075 MobiDBLite consensus disorder prediction 413 430 - -
Ahy6g1268 1075 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1268 Ahy-Chr6 19159169 19167020 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0071 16 618853 626705 Ahy6g1268 6 19159169 19167020 hybridization