Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1260 ATGGAATCTTTTGATCAAAGAAATAATAGTGGAGTATTTGGTTCTTCAGCTGCAGTTCCTAGACCACCATCGAACAATAACAGATTGAATGCTTTTAATCAGATGGGTGCAGGTGGCTCTGAGAATCCGAAGCCAGGTATTGGTATACCGCCATCACACCCTAGTACGAATTTGCCATATTCTCAGTATATAGCTTCTCAAAACCAACACCATTTAGGTTCTCAGAGACTGCGTTCGCCCAATTTGAGCCCAGGGTCATCATCATCTTCGTCGCATTCGAGGTCTATGTCCCAACCCTCATTCTTTTCCCTTGATTCCTTGCCACCATTGAGCCCTTTGACTTATCGAGACCCCGCTGCTTCTCCGGTGGCAGCTGCAACCTCTTTTGGTGATTCGGTCACAATGGATGTGTCTATGGAGGAAAATTTAGGTTCCACTCATACTGCACCTTCTTTGACCGTCAACAGAGGTCATAGTCTTCCTCCTCGCAAGGGGCACAGGCGCAGCAATAGTGATTCCCCTTTAGGAATATCCGGTCTTGTTCAATCTTATTCTCAGTCAGTTCCTACCAAGAATGTGAGCGACCGGGACAATTTGGTCTCCAAAGGAGAAAACACTGGTTTTGAGAAGCCAATTCAGTTAGTTTTAAAGGAGCCAAATAAGGATATGGTCCATTTTGACTGCTTTACTGGAGAAGCTATGGGCAAGAAAGAGGATTGCATAGATGATTTATTTAATGCGTACATGAATTTGGATAACATACAAAATATGAACTTTCCTGGCATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCAAAGACAGTTGAAAGTAGTGACAATGAAGTAGAAAGTCATGCGAATGGAAAGACAACTTCTGCTCAGGGAGCAACATCAAGCTATAAAGAAGAACGGAAGGAGGGTATCAAGAGGGGTTCTAGTGGAGACATTGCACCAGTAGGCCGACACCGGAGAAGCTTTTCATTGGATAGTTCCATCGGGGATTTTCAGCTTGAAGATGAATCTTCTAAGCTGCCTCCTTTGCAAAATCGATTTGGTCAACACTCGCCTAGCAATTCAATAGATGGTAAAACATCTGATACCAGTATAGAGTTTGTAAAGCGTGAATTCAGCTCAGACGAGTTAAAGAAAATAATGGAAAGTGACAAGCTCACTGAGATTGCCATGGCGGATCCAAAGCGTGCAAAACGGATTTTGGCTAATCGTGTCTCAGCTGCTCGGTCAAAGGAAAGGAAAACACGATATATTTCTGAACTGGAGCATAAGGTGCAAACTCTTCAGGCAGAAACAACCTCATTATCTACTCAATTTACTAAACTACAGATGGATAATTCAGAGCTTAAAAGTTTGAATAATGAGTACAAATTGAAGCTTCAAGCCTTGGAACAACAGTCCCAACTGAAAGATGCTTTGAATGAGACCTTGGATGCTGAAGTTCGGCGATTAAGGCGCACTGTCGCAAATCTTGGTGGAGATCCCCTCCTCTAA 1512 0.4306 MESFDQRNNSGVFGSSAAVPRPPSNNNRLNAFNQMGAGGSENPKPGIGIPPSHPSTNLPYSQYIASQNQHHLGSQRLRSPNLSPGSSSSSSHSRSMSQPSFFSLDSLPPLSPLTYRDPAASPVAAATSFGDSVTMDVSMEENLGSTHTAPSLTVNRGHSLPPRKGHRRSNSDSPLGISGLVQSYSQSVPTKNVSDRDNLVSKGENTGFEKPIQLVLKEPNKDMVHFDCFTGEAMGKKEDCIDDLFNAYMNLDNIQNMNFPGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTSAQGATSSYKEERKEGIKRGSSGDIAPVGRHRRSFSLDSSIGDFQLEDESSKLPPLQNRFGQHSPSNSIDGKTSDTSIEFVKREFSSDELKKIMESDKLTEIAMADPKRAKRILANRVSAARSKERKTRYISELEHKVQTLQAETTSLSTQFTKLQMDNSELKSLNNEYKLKLQALEQQSQLKDALNETLDAEVRRLRRTVANLGGDPLL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1260 503 MobiDBLite consensus disorder prediction 1 104 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 286 300 - -
Ahy6g1260 503 Pfam bZIP transcription factor 401 459 IPR004827 GO:0003700|GO:0006355
Ahy6g1260 503 MobiDBLite consensus disorder prediction 186 205 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 145 179 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 1 37 - -
Ahy6g1260 503 ProSiteProfiles GGDEF domain profile. 443 503 IPR000160 -
Ahy6g1260 503 PANTHER BZIP TRANSCRIPTION FACTOR 72 502 - -
Ahy6g1260 503 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 72 502 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 344 366 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 54 104 - -
Ahy6g1260 503 SMART brlzneu 397 461 IPR004827 GO:0003700|GO:0006355
Ahy6g1260 503 Coils Coil 417 444 - -
Ahy6g1260 503 Gene3D - 400 463 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 259 324 - -
Ahy6g1260 503 CDD bZIP_plant_RF2 402 452 IPR044759 GO:0003700|GO:0006355
Ahy6g1260 503 Coils Coil 452 489 - -
Ahy6g1260 503 MobiDBLite consensus disorder prediction 186 201 - -
Ahy6g1260 503 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 399 462 IPR004827 GO:0003700|GO:0006355
Ahy6g1260 503 SUPERFAMILY Leucine zipper domain 401 457 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1260 Ahy-Chr6 18867721 18871700 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy6g1260 bZIP_1 2.30E-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0087 16 835042 839030 Ahy6g1260 6 18867721 18871700 hybridization