Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1244 ATGGGTGATTCAGGATCTTCCAAGAGAATGTGGTGCTCAGTGCCAGAAAAGTTTCAGCTGCATGGAGCAATGTTGGCACTTCAATTTGGATATGCTGGCTTCCATGTTGTTTCAAGGGCTGCCCTTAACATGGGAGTTAGCAAGCTTGTTTTTCCAGTTTATAGGAACATCATTGCTTTGCTTCTCCTTCTTCCCTTTGCATACTTCTTGGAAAAGAAGGAGAGGCCAGCGATGACAGTGAACTTCCTAGGCCAGTTCTTTGTTCTGGCACTTGTCGGGATTACAGCAAATCAAGGTTTCTATTTGCTTGGGTTGGAGAACACATCACCTACCTTCGCTTCAGCAATACAGAACTCTGTTCCAGCCATTACATTTCTCATGGCTGCTATACTCAGGATCGAACAAGTGAGACTAAATAGAAAAGATGGAATATCGAAAGTAGTTGGAACAATCCTATGTGTAATTGGTGCAACAGTGATCACACTCTACAAGGGTCCAACAATATACTCTCCAAAACCAACAACAACATTATTATTAACAACAAGATCAACATTAATGGATCCAGTTGATGAGGGCAAAAACTGGACCCTAGGGTGCATTTACCTAATTGGACATTGTTTGTCATGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTTCTCAAGAAATACCCTGCAAGGCTCTCTGTCACTTCATACACTTGCTTCTTTGGATTATTGCAATTCATTCTCATTGCTCTCATTTTTGAAAGAGATTATCAAGCTTGGCTTTTCCATTCTGGTGCTGAAGCCTTCACTATTCTATATGCGGGAGTGGTGGCATCAGGAATTGCATTCGCTGTACAAATATGGTGCATTGATAGAGGGGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTTGCAATCATGGCTTCCTTTGCTCTTGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGCTAATTGTGGTTGGACTCTACCTAGTTTTGTGGGGTAAAAGTGAAGAGAAGAGGATTGCACAACTTGGAATGGCATCAAATAATATTAATGGAGATCATAGCATTATTAGGGCTTCAAGTCATGCCAAAGCATCATCACTCACTCAGCCACTAATCCTCCCTTCATCAACTGACAATCACGTTTAA 1161 0.4246 MGDSGSSKRMWCSVPEKFQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTVNFLGQFFVLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGISKVVGTILCVIGATVITLYKGPTIYSPKPTTTLLLTTRSTLMDPVDEGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFILIALIFERDYQAWLFHSGAEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKRIAQLGMASNNINGDHSIIRASSHAKASSLTQPLILPSSTDNHV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1244 386 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Ahy6g1244 386 Pfam EamA-like transporter family 25 161 IPR000620 GO:0016020|GO:0016021
Ahy6g1244 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 340 - -
Ahy6g1244 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Ahy6g1244 386 PANTHER WAT1-RELATED PROTEIN 13 344 - -
Ahy6g1244 386 PANTHER WAT1-RELATED PROTEIN 13 344 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1244 Ahy-Chr6 18503868 18506946 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0101 16 991593 995776 Ahy6g1244 6 18503868 18506946 hybridization
Ahy6g1244 6 18503868 18506946 Ahy17g2330 17 112395814 112398467 PCT
Ahy6g1244 6 18503868 18506946 Ahy8g0088 8 1491210 1493913 PCT
Ahy17g2330 17 112395814 112398467 Ahy6g1244 6 18503868 18506946 PCT
Ahy8g0088 8 1491210 1493913 Ahy6g1244 6 18503868 18506946 PCT