Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1239 ATGGAAACTAACTCAGTTTCCAAGCTTAGATTCTTGTTCTTCATGTGTGTACTTTTTGTGGGGTGTGATTTGATCCAATGCAGTGTGACCTATGATAAAAAAGCCATTGTTATCAATGGCCAAAGAAGAATCCTCATATCTGGCTCCATTCACTATCCTAGAAGCACCCCAGAAATGTGGGAGGATCTGATAACAAAGGCCAAAAATGGAGGACTTGATGTAATTGATACCTATGTTTTCTGGAATGTTCATGAACCTTCTCCTGGCAATTATAATTTTGAAGGAAGATATGATCTTGTACGGTTCATTAAGACAGTGCAGAAAGTGGGACTCTATGTTCATCTTCGGATTGGTCCTTATGTTTGTGCTGAGTGGAATTTTGGAGGATTTCCTGTTTGGTTGAAATATGTTCCTGGCATCAGTTTCAGAACAGATAATGGTCCTTTTAAGGTAAAGATGCATAGATTCACTGAGAAAATTGTCCAAATGATGAAGAATGAGAAGCTATTCCAATCTCAGGGTGGCCCTATCATTCTTTCTCAGATTGAGAATGAATATGGAGCACAAAGCAAGTCACTTGGAGCAGCTGGTCATTCATATGTAAACTGGGCTGCAAGAATGGCTGTTGGGTTAGCCACTGGAGTCCCTTGGGTTATGTGCAAAGAAGATGATGCCCCAGATCCTATTATAAATACTTGTAACGGATTCTACTGTGACTATTTCACTCCAAACAAACCATACAAGCCTAAACTTTGGACTGAGTCTTGGAGTGGCTGGTTTACTGAATTTGGTGGACCAATTTACCAACGACCTGTTGAGGATCTAGCATTTGGAGTTGCTCGTTTTATTCAAAGTGGAGGCTCATATTTTAATTACTACATGTACCATGGAGGAACCAATTTTGGAAGATCAGCTGGAGGCCCATTCATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGATTGATTAGAGAACCTAAATACAGTCATTTGAAGGATCTTCATGAAGCTATTAAGCAATGTGAAGCTGCTTTGGTTTCTTCAGATCCTGTTGTTAAACCTTTAGGAACATATGAGCAGGCTCATGTATTCTCTTCTGGAAGAACTTGTGCCGCTTTTCTGTCAAACTACCACTCGAATTCTGCAGCTCGAGTGACCTTCAATGGCAGACACTATGACTTGCCTGCTTGGTCCATAAGCATTCTTCCTGATTGCAAAACAGATGTTTTCAACACGGCAAGAGTGAGGACTAAACCTTCAGCAGCACAAATGTTACCTAGCAATTCAAAATTCTTATCATGGGAGACCTATGATGAGGATGTGAATTCTTTAGAGGAATCTTCAAGGATTTCAGGTTCTGGTCTTAAGGAACAGATAAGTGTTACCAGAGACACTAGTGACTACTTGTGGTACATTACCAGCGTTGACATTAGTTCATCAGAATCCTCTCTTAGAGGCGGACACAAGCCTAGCATCAATGTGCATTCGGAAGGCGACGCGGTCCATGTATTTGTGAATGGACAATTTGTAGGTTCTGCTTTTGGGACAATGGAAAGAAGAAGTTTCACATTCAATGGCCCTGTCAACCTCCATGCCGGAACAAATAAAATAGCACTACTCAGCATAGCTGCTGGATTGCCGAATGTTGGATTCCGTTATGAAACATGGAAGACAGGTATCTCCGGAGTTTCCATCCAAGGTCTCGATCATGGACAGAAAGATTTGACATGGCAAAGGTGGTCCTACCAGGTTGGTCTTAAAGGAGAAGCTATGAATTTGGTGTCTCCAATTAAGGTCTCATCTGTTGATTGGGTTAGAGAGTCACTAGCCACTCAAAACCAGCCCCAATTGAAATGGCACAAGGCATATTTCAATGCACCTGATGGAAATGAACCATTGGCATTGGACCTTGGAAGCATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTCAATGCAATTCTTGCAACTATGCTGGCACATATAGACCTGCAAAATGCCAACTTGGTTGTGGACAACCAACTCAAAGATGGTATCATGTTCCAAGATCATGGTTAAAGCCAACAAAGAACTTAATAGTAGTTTTTGAGGAATTAGGTGGGAATCCATGGAAAATATCTTTGGTAAAGAGGACAATACATTGA 2187 0.4106 METNSVSKLRFLFFMCVLFVGCDLIQCSVTYDKKAIVINGQRRILISGSIHYPRSTPEMWEDLITKAKNGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVKMHRFTEKIVQMMKNEKLFQSQGGPIILSQIENEYGAQSKSLGAAGHSYVNWAARMAVGLATGVPWVMCKEDDAPDPIINTCNGFYCDYFTPNKPYKPKLWTESWSGWFTEFGGPIYQRPVEDLAFGVARFIQSGGSYFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYSHLKDLHEAIKQCEAALVSSDPVVKPLGTYEQAHVFSSGRTCAAFLSNYHSNSAARVTFNGRHYDLPAWSISILPDCKTDVFNTARVRTKPSAAQMLPSNSKFLSWETYDEDVNSLEESSRISGSGLKEQISVTRDTSDYLWYITSVDISSSESSLRGGHKPSINVHSEGDAVHVFVNGQFVGSAFGTMERRSFTFNGPVNLHAGTNKIALLSIAAGLPNVGFRYETWKTGISGVSIQGLDHGQKDLTWQRWSYQVGLKGEAMNLVSPIKVSSVDWVRESLATQNQPQLKWHKAYFNAPDGNEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGQCNSCNYAGTYRPAKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRTIH* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1239 728 Gene3D - 592 728 - -
Ahy6g1239 728 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Ahy6g1239 728 SUPERFAMILY Galactose-binding domain-like 402 563 IPR008979 -
Ahy6g1239 728 Gene3D - 430 569 - -
Ahy6g1239 728 Pfam Beta-sandwich domain in beta galactosidase 348 418 IPR041392 -
Ahy6g1239 728 PANTHER BETA-GALACTOSIDASE 3 728 - -
Ahy6g1239 728 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
Ahy6g1239 728 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Ahy6g1239 728 SUPERFAMILY Galactose-binding domain-like 581 722 IPR008979 -
Ahy6g1239 728 Gene3D Glycosidases 22 344 - -
Ahy6g1239 728 PANTHER BETA-GALACTOSIDASE RELATED 3 728 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1239 Ahy-Chr6 18468796 18474136 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0105 16 1021466 1028951 Ahy6g1239 6 18468796 18474136 hybridization
Ahy6g1239 6 18468796 18474136 Ahy17g2336 17 112807539 112812409 PCT
Ahy6g1239 6 18468796 18474136 Ahy8g0081 8 1400888 1405475 PCT
Ahy17g2336 17 112807539 112812409 Ahy6g1239 6 18468796 18474136 PCT
Ahy8g0081 8 1400888 1405475 Ahy6g1239 6 18468796 18474136 PCT