Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1220 ATGGGATCAGCTTGCTGTGTTGCTGCGAAGGGTCGCAGTGTACCTGAAAGAACTGGAGAGAAAGGTTTGCATCGAGCTGGATATTCACCGAAATGTGGCTCTGGATTGAATGGTAATCATGTGCCTATCACCAGGGAGAACGAGAATCCCACCTGTCAGAACTCTCACTTGACTAGCAGAAATGTGAGCATGGAATTTAAAGGTCCATTAAGTTCTGAAAGAGGTCATTCATCAGATGGAGGAAGCACCCTGGAGAATTCTGCAACTCCAATATCTCAGAAGTCCCCTTTTGATGACACATTTGTTCCAAATCTGATAGCTACTCCATCTGATCTGTCCATATCAAGCAAATTTTCTATGATGAATTCTGTAGACTCTTCAATTCCGAATCATTCATTTCCAATTCCTCCGGTTTTCTCGTCGCCTGCACTAGATCCCCATTCTAATTCTACACCATCAAGACGGGCACATCGATCTCCAGGTCATCCACTATTGAGACAGATTTCAGATAGTCAGATCTTGGGTCTGAAATCACCGGGCTACTCGATTTCTGAGGGAAGGCCATCATTTGTATTCTCCCCCTGTAGCAATGAAATGGCAACAGGATCCCTATATGGATCATCCGATGGCTGGTCCATGCGCACCTTTTCAGAGATGGTGGCTTCTTCTCAAAGGGAAATATGCTCTTCCGACAGTGAATATTTAGGATCCGGTCGTCACAAGATAATTGGATCCAGCAGCAGCAGGTTCTTGCATTCTCCCTCAATGGATCAACAATCTTGTCCAGCTTGCGCGAGGCCTTTGACCGAACTACCAAATTTTGTTGCCAGAAGTGATGTCTCATGTGTTGCTATCCTTGTGTGTGGCCATGCATATCATGCCGAATGCTTAGAATCTAGAACTGCCGAGGCAAACAAGTTTGATCCAGCATGTCCAGCTTGTATCGTCGGAGATAATCACTCGTCAAAGTCATCCAGAAAAGATATTAGGGTCGAATCAGAGACTTCTAAGGGAAAGCACCAGAAGATATCTCGAAGCCGTGTAGCTGATAGCTACCTTGAATCTGATGTCAATGTTTCCGAACCACAGAAAGACATTGAAAGAATAGGGAAAGTTTCAAAGATGGAGCCGAGCTCAAGTACTAGGAGCACACATGGAAAGCCGTTCTTGAAGAAGCACTTTTCGTTTCGGTCCAAATCAAATCGAACCCTGATGGAGAATGATACTGCAAGGACAAAGGGCTTTTGGGGAAGACACCGAAAAGAATGA 1269 0.4492 MGSACCVAAKGRSVPERTGEKGLHRAGYSPKCGSGLNGNHVPITRENENPTCQNSHLTSRNVSMEFKGPLSSERGHSSDGGSTLENSATPISQKSPFDDTFVPNLIATPSDLSISSKFSMMNSVDSSIPNHSFPIPPVFSSPALDPHSNSTPSRRAHRSPGHPLLRQISDSQILGLKSPGYSISEGRPSFVFSPCSNEMATGSLYGSSDGWSMRTFSEMVASSQREICSSDSEYLGSGRHKIIGSSSSRFLHSPSMDQQSCPACARPLTELPNFVARSDVSCVAILVCGHAYHAECLESRTAEANKFDPACPACIVGDNHSSKSSRKDIRVESETSKGKHQKISRSRVADSYLESDVNVSEPQKDIERIGKVSKMEPSSSTRSTHGKPFLKKHFSFRSKSNRTLMENDTARTKGFWGRHRKE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1220 422 MobiDBLite consensus disorder prediction 40 66 - -
Ahy6g1220 422 MobiDBLite consensus disorder prediction 321 349 - -
Ahy6g1220 422 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 416 - -
Ahy6g1220 422 MobiDBLite consensus disorder prediction 75 98 - -
Ahy6g1220 422 PANTHER EXPRESSED PROTEIN 1 416 - -
Ahy6g1220 422 MobiDBLite consensus disorder prediction 139 163 - -
Ahy6g1220 422 MobiDBLite consensus disorder prediction 9 98 - -
Ahy6g1220 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 316 IPR013083 -
Ahy6g1220 422 ProSiteProfiles Zinc finger RING-type profile. 261 314 IPR001841 -
Ahy6g1220 422 SUPERFAMILY RING/U-box 257 314 - -
Ahy6g1220 422 MobiDBLite consensus disorder prediction 319 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1220 Ahy-Chr6 18106592 18109558 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0117 16 1126856 1130442 Ahy6g1220 6 18106592 18109558 hybridization