Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1219 ATGGCCTCATCGAGTGGAAACTCGTCTACATCCACCAAATTTTGTGGCTCTGAAGAAGATTTGCAACTTCTGATGGATCAAAAGAAGAGGAAGAGAAAGCAGTCGAACCGCGAATCGGCGAGGAGATCTAGAATGAGGAAGCAAAAGCACTTGGATGACCTAGTTGCTGAAGTTGAGAAGCTTAAAAAGGAGAACAATGAAATCCTTACCGGAGTTAAGATCACAACACAAAAGTTTCTGAATATTGAGGGAGAAAATTCCATCTTAAGGGTCCAAATGAGTGAACTTACCAATAGGCTTGAATCACTCAATCATATGCTTAGCTTCTTCAACAACAATAACAACACCATCACAAGCACTAGTCCAATTTTTGATAGTGAATTCTACCATGATTATAATTTCATGAATCATCATCACATTAACATGTGCCTTAACCAACCCATCATGGCATCTTCAAATCACATGTTTGAGTGGTGA 477 0.392 MASSSGNSSTSTKFCGSEEDLQLLMDQKKRKRKQSNRESARRSRMRKQKHLDDLVAEVEKLKKENNEILTGVKITTQKFLNIEGENSILRVQMSELTNRLESLNHMLSFFNNNNNTITSTSPIFDSEFYHDYNFMNHHHINMCLNQPIMASSNHMFEW* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1219 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
Ahy6g1219 158 Gene3D - 26 79 - -
Ahy6g1219 158 PANTHER BZIP TRANSCRIPTION FACTOR 1 154 - -
Ahy6g1219 158 Coils Coil 44 71 - -
Ahy6g1219 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 89 IPR004827 GO:0003700|GO:0006355
Ahy6g1219 158 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Ahy6g1219 158 SUPERFAMILY Leucine zipper domain 28 80 IPR046347 GO:0003700|GO:0006355
Ahy6g1219 158 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Ahy6g1219 158 MobiDBLite consensus disorder prediction 1 51 - -
Ahy6g1219 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 154 - -
Ahy6g1219 158 Coils Coil 86 113 - -
Ahy6g1219 158 Pfam bZIP transcription factor 28 68 IPR004827 GO:0003700|GO:0006355
Ahy6g1219 158 Coils Coil 18 38 - -
Ahy6g1219 158 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1219 Ahy-Chr6 18089997 18091541 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy6g1219 bZIP_1 7.30E-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0118 16 1134402 1135908 Ahy6g1219 6 18089997 18091541 hybridization