Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2529 ATGGATCCACCACCAACACAGCCACCAGCAATGCCACCACATCCATCCACCATGGCTCCCACCACTGTCATGGCTGCCACTGCCACATCAATTCAAACAAACAACCCTGACTCGGTTGAATCCTCGCCGCGCTGTCGTATCGGTGAAACATGGAACGATGAGCTTATTGTGCCGGTCCCAGGCGCCAAGCTCCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTCAGTTACATAGGTGGTGACACTAGAATTGTGGTGGTGGATCGCAATTCAACCCTAAAGGACCTCTGTTTGCGCCTTTCCCGCACTTTACTCAATGGAAGACCCTTCACACTCAAGTACCAATTACCAAACGAGGACCTTGACAACCTCATCTCTGTCACCACTGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGTGTGGCTGCAGCATCAGCATCTACCCTGAAGCCTTCACCTTCAAGACTCAGGGTGTTCCTGTTCTTCTCCAAGCCAGAGACCACTGTTTCAATGGGATCACTCCTTGATGATGCGAAATCTGAGACATGGTTCGTGGATGCACTCAACAACTCGGGGATGCTCACAAGGGGAGTGTCAGATTCCGCAGCAGGAGAAACCATTGTAAACCTTGATGGTGTTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCAGGCTGCGGCAGTGGCAGAGTCTTTGGCTCTGACTGATAATATCACTGGCAACAATAACAACAATAGCAACAAGGTGAAAAATTTGCAGGATGTTGCAGCTGTGAATTCACTGCCTGGCTCACCTTCATCAGCTTCTTCTCCTTCAATGGCTAATCTCCCACCCATCCGGGTTCGTGTCGATGACAATGGTGCTAGTAGGCTTCAGCAGGAGCAAAGGGTTGGGGTGATGGAGGAGCAGTTAGCACAGATGACAATTGGCGCAAGTGGTGTGAGGCGAGATGAAGGGTTTGTTGTTGTTCCCTCTACTGTGGCTATGCCTGCTGCAGTGCCTGCAACTATGAGTTTGGCTGCAGCAGCAATGGTTACTAGCAATAGTAGTGATATCATGAATAGGCTTATTATCTCTGAGGATGAGAGATCAGATCCTGGTGTTCCTCTTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGGTGGTGGTGTGAGTTTACCTTCTCCAGATTCAGTTGCAAGTGACAGTAGTAGCATTGCATCAACAAATTCTTTCTCGAAGAATGTGTACTATCAAGAACAAGTCCAACCTTCACATGTAGATAACAAAGCTCCTACCATAAGCAATGCCAAGATTGAAATTAGAGAACAAATTCAGGATCCAAATTACACATTACCTCCACAATTGGATCAAAACCAGCAACTCCACCAGCAATTTGTGCAAGCAAGCAGCCCCTACATTCACCACCCTGCGGCCGCCACCAATACAGTGCCAGTGTCATCCTACTACCCAGTTTACGCACCGCCGCCACCGCTGCCATCACAGCCAACACTTCACCAGCATCCAATTCCCCAAACTCAACAACAGCAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTGCAACACAACATTGCTGATCCTAACATGGTAGCATCAGGTAGACCACTAGTACCCCAGAGTATTGCTGCTCCTGCAGTGTCAACAACAGCATACAAAGATGGCACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCACAAACTACTCAGGCATTTATTCAAATACCTTCTAGTCACTTTCAGCAACAACCACAGTATGTGGGTTTGACCCAAGTTCAGCACCATCAACCACCACCACCACCACAGCACATTGCTGTGGCTCCATCTGGTAGTGGTGGAGGTGGTGGTGCTAATTACGGCTATGAATATGGTGGTGGCACTGTGCAAGATCAAGCTGCATACTACACACAACAGCAACAAGCTACTACAGCTCCATTGACTTCTCAGTACCAATCCATGACTCCGGCGGCGGCAGCTGCGGCGCTATCGGATGTTTCGAAGCAATTCCCCAATGAAAGTCTTCAGCAGCCAAACAGAGCTTCACAACCCGTATAG 2154 0.4875 MDPPPTQPPAMPPHPSTMAPTTVMAATATSIQTNNPDSVESSPRCRIGETWNDELIVPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVTTDEDLDNMIEEYDRVAAASASTLKPSPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGMLTRGVSDSAAGETIVNLDGVGPAVSASGSSNNLEAQAAAVAESLALTDNITGNNNNNSNKVKNLQDVAAVNSLPGSPSSASSPSMANLPPIRVRVDDNGASRLQQEQRVGVMEEQLAQMTIGASGVRRDEGFVVVPSTVAMPAAVPATMSLAAAAMVTSNSSDIMNRLIISEDERSDPGVPLGFGKPPLPLQLVQPRTGGGVSLPSPDSVASDSSSIASTNSFSKNVYYQEQVQPSHVDNKAPTISNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYIHHPAAATNTVPVSSYYPVYAPPPPLPSQPTLHQHPIPQTQQQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRPLVPQSIAAPAVSTTAYKDGTLPIYPPRPNTQPQTTQAFIQIPSSHFQQQPQYVGLTQVQHHQPPPPPQHIAVAPSGSGGGGGANYGYEYGGGTVQDQAAYYTQQQQATTAPLTSQYQSMTPAAAAAALSDVSKQFPNESLQQPNRASQPV* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2529 717 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 710 - -
Ahy5g2529 717 CDD PB1_UP2 67 171 - -
Ahy5g2529 717 SMART PB1_new 78 171 IPR000270 GO:0005515
Ahy5g2529 717 SUPERFAMILY CAD & PB1 domains 79 182 - -
Ahy5g2529 717 PANTHER OS05G0427100 PROTEIN-RELATED 1 710 - -
Ahy5g2529 717 MobiDBLite consensus disorder prediction 400 420 - -
Ahy5g2529 717 Gene3D - 84 171 - -
Ahy5g2529 717 Pfam PB1 domain 79 171 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2529 Ahy-Chr5 100745244 100748608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2529 63 200 MAP Kinase Kinase Kinase AT5G57610 44.286 4.93e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2716 15 143740802 143743897 Ahy5g2529 5 100745244 100748608 hybridization