Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2230 ATGATGAACCTTTCCTTCTTTGGTAGGAAGCTACAACATCTTTTTAGCCCTTATTTCCAATTCAACTTCAACTCATTTTTCATTCAGCTTTGTTATTTTATGATCATGTCTGTTTTTGGATACTTGGGTCTCAAGGTATCGAAACCAAAAACCTATGTTAAGCCTAAGAACTTCGACCTGTTTTATACTTCTGTCTCTGCTTCTACTGTCTCAAGTATGACGGCCATAGAAATGGAAGTTTTCTCTAACTCCCAACTCGTCCTCATAACTTTTCTTATGTTTTTTGGTGGTGAAGTTTTCATTTCCTTACTAGAACTTGTCTTTGCTAGGTTCAATAACAATTCATTCACTTCCATGAAAAATGATTATAGTGTCAAAGTTAGTACTAATAATAGTCTTCCAATAAAAAAGGTCAATGATCAAATTGAGCTTGGTTTAGTTTCTATTCCTAATCATCACTCATCACAAGACCAAAACCAAGTCATTGATGTCAATTATGATATTAACAATAAAGATATGCTACTTAGGTCTAACTCCCTTAAGTATTTGAGTCATGTAGTTTTAGGTTACTTTTTGGTGCTTCAATTTGTTGGCACTTTCTTGGTTTCTATGTACATGAGCTTCATACCTAGTGCAAGGCAAGTACTTAGAGAAAAAGGTATCAAAACCCTAACATTTTCTTTATTCACCATAGTTTCAACTTTTGCAAGTTGTGGCTATGTCCCCACAAATGAAAATATGATAGTTTTCAAGAAGAATTCAGGCCTTCTTATTATTATTCTCCCATATATCCTTCTTGGTAACACCTTATATGCACCATGCTTGAGGTTTGTGATTTGGGTTCTTGAGAAAATTACCAAAAGAGAGGAATTTTCATACTTGCTTAAGAATTCAAAGGAAATAGGTTATGGTCATTTGCTACCTGCCCTTCATTCTTGGCTACTTGTTGCTACCGTTTTGGGGTTCAATATAATTCAATTTGTGATTTTTTGTTCCATGGAGTGGGGAACACAAATCACGGATGGTTTGAATCCTTATCAGAAATTTGTTGCGTCTTTGTTTCAAATCACAAATGCTAGACATTCTGGTGAATCCGTTTTTGATCTCTCTACTATCTCTTCAGCTATATTGGTCCTCTTTGTCGTCATGATGTACCTTCCACCATACACAACATTCATGCCCATAATGGACCACAAAACTGAAAATGATGCCAAGAGAGACAAAAGAAGCCTAGTGGAGTGCCTTTTGTTCTCTCAACTTTCATATTTGGTTATTTTCATTATTTTGATTTGCATCACTGAGAACAAAAGCCTCATAGAGGATCCTCTCAACTTTAATGTTTTCAATATCACCTTAGAAGTCATCAGTGCATATGGGAACGTAGGTTTCTCAATGGGATATAGCTGCGCAAGGCGATTGAAAGCGAATGGTAGTTGCAAAGATTTATGGGTTGGATTTTCTGGGAAATGGAGCAACAAAGGCAAGTTCATCCTTATTCTTGTCATGTTCTTCGGAAGGCTCAAGAAATTCAACATGAAAGGTGGCAAAGCTTGGGACCTATCCTAG 1566 0.3621 MMNLSFFGRKLQHLFSPYFQFNFNSFFIQLCYFMIMSVFGYLGLKVSKPKTYVKPKNFDLFYTSVSASTVSSMTAIEMEVFSNSQLVLITFLMFFGGEVFISLLELVFARFNNNSFTSMKNDYSVKVSTNNSLPIKKVNDQIELGLVSIPNHHSSQDQNQVIDVNYDINNKDMLLRSNSLKYLSHVVLGYFLVLQFVGTFLVSMYMSFIPSARQVLREKGIKTLTFSLFTIVSTFASCGYVPTNENMIVFKKNSGLLIIILPYILLGNTLYAPCLRFVIWVLEKITKREEFSYLLKNSKEIGYGHLLPALHSWLLVATVLGFNIIQFVIFCSMEWGTQITDGLNPYQKFVASLFQITNARHSGESVFDLSTISSAILVLFVVMMYLPPYTTFMPIMDHKTENDAKRDKRSLVECLLFSQLSYLVIFIILICITENKSLIEDPLNFNVFNITLEVISAYGNVGFSMGYSCARRLKANGSCKDLWVGFSGKWSNKGKFILILVMFFGRLKKFNMKGGKAWDLS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2230 521 Pfam Cation transport protein 178 472 IPR003445 GO:0006812|GO:0008324|GO:0055085
Ahy5g2230 521 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 521 - -
Ahy5g2230 521 PANTHER SODIUM TRANSPORTER HKT1 17 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2230 Ahy-Chr5 94205323 94209533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2230 45 520 Inorganic Solute Cotransporters AT4G10310 49.489 6.81e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2230 K24976 - gmx:100779582 668.307