Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0686 ATGCCCTCCTCCGACTCCGGCGAAAGCCGTCGATCAGCCAAGCCTCACAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCGTGCCCTCGCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAACTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCCGTGACATCCCCGTCGGCGGTGGAAGCCGTAAAAACGCCAAGCGCTCTCGCACCGTTCCTTCAGCCTCCACCGCCACAACCTCCTCCTCCGCGGGTCCGGCCGTCACCTCGGTTTCTTCTGTGACCCCGCTCACCATGGTTCCCGTGGCCGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGAGTAGTTGTGGATGGTGAAGCAAAGGGTAATAACGTGAGCTTGTGCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAGCAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTTGGGCTTGGTCTTGGGCCTGGCCTCGAAGATGTTGGATTTGGGATGGGGATGGGGAGAGGCGGTTGGGCTTTCCCGGGCGTGGTGGCGGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGCTCCGGTGTTGGGCACACGTGGCAGTTTGAAGGCGGCGATCAAGGTGGCTTTGTTTCTGGAGACTGCTTCCCTTGGCCGGGACTAGCCATTTCCACACCCGGAAATGGTCTCAAATAA 753 0.6135 MPSSDSGESRRSAKPHNTSLAPPPAEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTVPSASTATTSSSAGPAVTSVSSVTPLTMVPVAGNNHPGAPVQFGGVVVDGEAKGNNVSLCGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEDVGFGMGMGRGGWAFPGVVADGGSIGGGVAGSGVGHTWQFEGGDQGGFVSGDCFPWPGLAISTPGNGLK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0686 250 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 247 - -
Ahy5g0686 250 MobiDBLite consensus disorder prediction 1 30 - -
Ahy5g0686 250 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Ahy5g0686 250 MobiDBLite consensus disorder prediction 84 106 - -
Ahy5g0686 250 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Ahy5g0686 250 MobiDBLite consensus disorder prediction 71 106 - -
Ahy5g0686 250 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 247 IPR045174 GO:0003700|GO:0006355
Ahy5g0686 250 MobiDBLite consensus disorder prediction 1 16 - -
Ahy5g0686 250 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0686 Ahy-Chr5 9044631 9046139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0686 1 250 C2C2-Dof Transcription Factor Family AT3G50410 51.894 1.70e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy5g0686 zf-Dof 3.50E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0686 - - aip:107620759 338.961