Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0604 ATGCATACATATTACAAATACGATAATTTTGTTTTTGTTTTTGTTTTTGGTTTTGGTTACTATCCACTCCCTACTCTCTCTACTTTGCAGAAGCAGAAGAAGCAGAGTAACACACTTTGCAACGTTCTGAATTCTGATTATTATGTAAAATCAGAGATACAGAAACAGAGAAAGAGTAGTGCCATGAAACAAACAACAAACAATGCAACAAACACAAACACCTTATCTGCTTTGAACATGAACATGCCTCACACACAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGATGATGATTCTCCCTCCTTCTTCGATGCTCTTCTCTGCGAAGAAGAGAAGAACATTCTCGATGATGATGATGACAACCACCAAAGCAGCCTTCTCATGGACAATCGGGAACACGACCACATCCTCTCTCTTCTCTCCAAAGAGACACACACTCACACCATTCATGCTTTTCTCGAGGCTCCACGAAACGACGCCGTCTCCTGGATTTCCAAAGTTAGCTGCTTCTATGGCTTCACTCCTTTGACCACTGTACTTGCAGTCAACTACTTCGACAGGTTCGTCACAAGCCTAACATTTCAGAGGGACAAGCCATGGATGACTCAGCTCACTGCTCTTGCCTGTTTATCTCTTGCTGCCAAAATGGAAGAGATCCATGTCCCACTTCTCTTAGACCTCCAAGTGGAGGAACCCAAGTTCTTGTTCGAAGCCAAGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGATTGGTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTCTGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGGAACAAGTGAATGAGTGCTACAAACACATAGTGAAACAACTGGTTTTGAATCATGAAGGCATTTACAATGTTTGCCAAAAACGCAAACGGATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTCACTATCAATGGAGCCAATGTTTAAGAGGAGCAGAGCTCCGGACCAGCAGATGCGATTCGCCACAGTAAATCGAGTGTCTATCAATGTTATAGATAGTCCTCCTTAA 1314 0.4262 MHTYYKYDNFVFVFVFGFGYYPLPTLSTLQKQKKQSNTLCNVLNSDYYVKSEIQKQRKSSAMKQTTNNATNTNTLSALNMNMPHTQEDEEEEEEEEEEEEDDDSPSFFDALLCEEEKNILDDDDDNHQSSLLMDNREHDHILSLLSKETHTHTIHAFLEAPRNDAVSWISKVSCFYGFTPLTTVLAVNYFDRFVTSLTFQRDKPWMTQLTALACLSLAAKMEEIHVPLLLDLQVEEPKFLFEAKTVQRMELLVLSTLQWRMNPVTPISFFEHIVRRIGLHWEFLWRCQRVLLSVIPNSRFMGYLPSTLAAATMIHVIKEIEPLNAMEYINQLMGLLKTSEEQVNECYKHIVKQLVLNHEGIYNVCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISPSLSMEPMFKRSRAPDQQMRFATVNRVSINVIDSPP* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0604 437 MobiDBLite consensus disorder prediction 84 105 - -
Ahy5g0604 437 SUPERFAMILY Cyclin-like 134 262 IPR036915 -
Ahy5g0604 437 SUPERFAMILY Cyclin-like 265 360 IPR036915 -
Ahy5g0604 437 Pfam Cyclin, N-terminal domain 160 262 IPR006671 -
Ahy5g0604 437 SMART cyclin_7 167 255 IPR013763 -
Ahy5g0604 437 Pfam Cyclin, C-terminal domain 264 362 IPR004367 -
Ahy5g0604 437 CDD CYCLIN 162 254 IPR013763 -
Ahy5g0604 437 PANTHER CYCLINS 103 420 IPR039361 -
Ahy5g0604 437 Gene3D - 159 262 - -
Ahy5g0604 437 SMART Cyclin_C_2 264 377 IPR004367 -
Ahy5g0604 437 Gene3D - 263 350 - -
Ahy5g0604 437 PANTHER CYCLIN-D3-2 103 420 - -
Ahy5g0604 437 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0604 Ahy-Chr5 7705357 7707861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0604 94 427 Core Cell Cycle Gene Families AT5G67260 47.541 4.99e-100 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0604 5 7705357 7707861 Ahy19g3278 19 155886328 155888273 PCT
Ahy5g0604 5 7705357 7707861 Ahy9g2360 9 112443718 112445670 PCT
Ahy11g0990 11 21778015 21780076 Ahy5g0604 5 7705357 7707861 PCT
Ahy1g0991 1 17057546 17059575 Ahy5g0604 5 7705357 7707861 PCT